Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01751 ATGACAGCATTCACTGTAGGAGAAGATGGAGCCTCTTCATCTGCTTCTTCTCCTTGCCATTCAAGTTCAACCACAAGGTTATGCAGCTACcatgtgtttttgagttttagAGGAGAAGATACACGCAAAGGATTCACCGATCATTTGTGTGCTTCCCTTGAGAGAAAAGGGATCACAACTTTCAGAGATGACAAAGACCTTGAGAGAGGGCAAGCCATTTCACAAAAGCTACTCAATGCAATTCAAGATTCTATGTTTGCTATTACTATCCTCTCACCAGACTATGCTTCTTCCACTTGGTGTTTGGATGAGCTTCAAATGATCATGGAGTGCAGTAGCAATAACAACTTGCAAGTTTTGCCAGTCTTCTATGGTGTGGATCCATCTGATGTAAGGCATCAAAGAGGTTGCTTTGGGGATGCTTTCAGAAAACATCAAGAAAAATTTGGTAAACACAGTGACAGGATTGAAAGATGGAGAGATGCTTTGACACAAGTTGCCAGTTACTCTGGATGGGATTCCAAGGACTGGCATGAGGCTTTACTTGTGGAAAGCATTGCTCAACACATACATAGAAAGTTGGTTCCTAAATTGCCATCTTGTATGGAGAACCTTGTTGGGATTGCTTCAAAGGTGGAGGAAGTGAACAAGCTCATAGGTATGGGGTTGAATGATGTTCGCTTTATAGGCATATGGGGTATGGGTGGCATAGGTAAGACTACAATTGCTAGAGCTGTCTATGAGGCAATCCAATGTGAATTTGAAGTTACTTGCTTTCTTGTTAATGTTAGAGAAATGTCTGTGTCAACTGGTTTGGTTCACATACAAAGACAATTGCTTTCTCATCTGAGTGTAAGTAGGAATGATTTTCATAATTTGTATGatgggaaaaaaataatacaaaactcTTTATGCAGAAAAAAGGTACTACTTGTTCTTGATGATGTGAATAAAGTAAACCAGTTGGAGAATTTGACTGGTAAACAAGATTGGTTTGGTCCAGGAAGCAGAGTATTAATCACAACAAAAGATAAGCACTTGCTAATGACACATGGAGTACATAAAACTTATGAGGTTGGACTATTACCCCAAAATGAAGCCCTTCATCTCTTTTGTTTGAAAGCCTTTAAAGCAGATCAACCACAAGAAGGGTATCTGGATTTGTCCAAAGAAGTGGTTGACTATACTGGTGGTCTTCCATTGGCACTTGAGGTGTTAGGTTCCTATCTCTATGGAAGAAATGTTGATCTTTGGCATAGTGCTGTTAATAATATAAGAAGTGCACCTCTCCGTGAAATCCAAGAAAAACTGGAAATATGTTATCAGAGTTTAGATACCAAGGGGAAGGCTATATTTCTAGATATTGCATGTTTCTTCAAGGGAATGGAAAGAGATAAAGTAATAGATATATTACAAAATTGTTATGGTTATTGCCCCAAAATTATAATTCAAGATTTGATTGAAAGATCATTGATAACTCTAGATCATGTGAATAATAAACTGGGGATGCATGATTTGCTTCAAGAAATGGGCAGGAATATTGTATTTCAAGATTCTCCAAATGATCCTGGTGGATGGAGCAGGTTGTGGTCTGAAGAGGACATTGACCTTGTGTTGACAACCAATACGGGAACTGGAAAAATTAGCAGTATAGTTCTGAACTTACTTCGACCATATGAAGCATTCTGGAGAACTGACGCATTCTCAAAGACAAGTCAGCTAAAATTGCTCAGTTTAAATGAGGTGCAACTTCCCCTTGGCCTCAGCTGCCTTCCTTGTTCGTTAAAAGTTTTTCACTGGAGAGGATGTCCTTTGAAAACTCTGCCACTAACAGATCAATTATATCAATTTGTTGACATTAAATTATCTCATAGCAAAATTGAACAACTTTGGCAAGGAACAAATTATTTTATGAAGAAGCTAAAGTACCtgaatttgaaattttccaAGAACCTCAAGAGATTGCCCGATTTATCTGGGGTTCCAAatcttgaaaaattgattcttaaaGGCTGCGTAAGCCTATCTGAGATTCATCCATCCCTTGTACACCACAATAACGTTATTCTGGTGAATTTAGAAGACTGTAAAAGTCTTGAATCTCTTCCAGAGAAATTGGAGATGAGTTCCCTGAAGGAGTTCATTCTTTCTGGCTGCTGTGAATTTAAATTCCTTCCAGAGTTTGGGGAAAGCATGGAAAATCTATCAGTGCTTGCTTTACAAGGAACTGCTATAAGAAAACTACCCTCATCACTTGGATGCCTAGTTGGACTTACTGATTTGAACTTGAAGGACTGCAAAAGTCTTGTTTGTCTTCCAGATACCATTCATGGATTGAATTCCCTCAGAGTTTTGGAAATTTCTGGTTGCTTAAAACTCTCTAGATTGCCAGATTGTTTAAAGGAAATCAAGTGTTTGGAGGAACTCCTTGCTAATGATACTGCTATTGATGAACTGCCATCCTCCATCTTATATCTAGATaatcttaaatttttatcatttgcTGGGTGCAAAGGGACGTTGACGAAGTCAATGAACCGGTTTATTCCCTTCAACCGGATGCGAGCAAGTCAACCAGCACCCACTGGATTCAGATTTCCAAATTCTGTTTGGAATCTACCCTCTTTGAAACATATAAATTTAAGTTACTGTGATCTTTCTGAAGAATCAATCCCACATTATTTTTGCCACTTAACGTCATTGGTGTCTTTGGATTTAACTGGTAATAATTTTGTTACCATACCAAGCAGCATTTCTAAACTTCCGAAGCTGGAACTTCTTACTCTAAATTGCTGCGAAAAGCTTCAATTTCTGCCAGAGCTTCCATCAAGTATAATGCAACTGGATGCAAGCAATTGTGATTCACTGGAAACTCCCAAATTCGATCCAGCAAAGCCATGTAGTCTCTTTGCGTCACCAATAAAACTGTCCTTACCACAAGAATTTAAGAGCTTTATGGAGGAACGTTGTCTCCCCACTACAAGATTCGATATGCTTATCCCTGGGGATGAAATTCCATCTTGGTTTGTTCCTCAAAGATCAGTTTCCTGGGCAAATGTATATATCCCTAATAATTTCCCTAATAATTTCCCTCAAGATGAATTGATAGGATTTGCTTTGTGTTTCCTATTAGTGAGTTACGCTGTCCCACCTGAATTGTGCAACCATGAGATTGATTGTTATTTGGTTGCATCTAATGATAAGAAGTTGATCAGCTCCAGGAGATTACCTCCTATGGATCCATGTTCTCCTCATCTTTATATTCTCTATTTGTCCATTGAACAATTTCGCGACAAAATTCATGAAGATTATTGGAGTGACATTGAATTTGCATTTGCATTGAAATGTTATTGCTGTCATTCATTGCAAATAGTGAGGAGTGGCTGCCGTTTGGTGTGTAAACAAGATGTTAAAGTATTTCGAGATCATATAGTCGTCTGTCCTTGA 3447 0.376 MTAFTVGEDGASSSASSPCHSSSTTRLCSYHVFLSFRGEDTRKGFTDHLCASLERKGITTFRDDKDLERGQAISQKLLNAIQDSMFAITILSPDYASSTWCLDELQMIMECSSNNNLQVLPVFYGVDPSDVRHQRGCFGDAFRKHQEKFGKHSDRIERWRDALTQVASYSGWDSKDWHEALLVESIAQHIHRKLVPKLPSCMENLVGIASKVEEVNKLIGMGLNDVRFIGIWGMGGIGKTTIARAVYEAIQCEFEVTCFLVNVREMSVSTGLVHIQRQLLSHLSVSRNDFHNLYDGKKIIQNSLCRKKVLLVLDDVNKVNQLENLTGKQDWFGPGSRVLITTKDKHLLMTHGVHKTYEVGLLPQNEALHLFCLKAFKADQPQEGYLDLSKEVVDYTGGLPLALEVLGSYLYGRNVDLWHSAVNNIRSAPLREIQEKLEICYQSLDTKGKAIFLDIACFFKGMERDKVIDILQNCYGYCPKIIIQDLIERSLITLDHVNNKLGMHDLLQEMGRNIVFQDSPNDPGGWSRLWSEEDIDLVLTTNTGTGKISSIVLNLLRPYEAFWRTDAFSKTSQLKLLSLNEVQLPLGLSCLPCSLKVFHWRGCPLKTLPLTDQLYQFVDIKLSHSKIEQLWQGTNYFMKKLKYLNLKFSKNLKRLPDLSGVPNLEKLILKGCVSLSEIHPSLVHHNNVILVNLEDCKSLESLPEKLEMSSLKEFILSGCCEFKFLPEFGESMENLSVLALQGTAIRKLPSSLGCLVGLTDLNLKDCKSLVCLPDTIHGLNSLRVLEISGCLKLSRLPDCLKEIKCLEELLANDTAIDELPSSILYLDNLKFLSFAGCKGTLTKSMNRFIPFNRMRASQPAPTGFRFPNSVWNLPSLKHINLSYCDLSEESIPHYFCHLTSLVSLDLTGNNFVTIPSSISKLPKLELLTLNCCEKLQFLPELPSSIMQLDASNCDSLETPKFDPAKPCSLFASPIKLSLPQEFKSFMEERCLPTTRFDMLIPGDEIPSWFVPQRSVSWANVYIPNNFPNNFPQDELIGFALCFLLVSYAVPPELCNHEIDCYLVASNDKKLISSRRLPPMDPCSPHLYILYLSIEQFRDKIHEDYWSDIEFAFALKCYCCHSLQIVRSGCRLVCKQDVKVFRDHIVVCP 1148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01751 1148 SUPERFAMILY L domain-like 771 1097 - -
Tsu04g01751 1148 SUPERFAMILY Toll/Interleukin receptor TIR domain 21 172 IPR035897 -
Tsu04g01751 1148 Pfam NB-ARC domain 216 435 IPR002182 GO:0043531
Tsu04g01751 1148 ProSiteProfiles TIR domain profile. 28 194 IPR000157 GO:0007165
Tsu04g01751 1148 Gene3D - 22 192 IPR035897 -
Tsu04g01751 1148 MobiDBLite consensus disorder prediction 1 23 - -
Tsu04g01751 1148 Pfam TIR domain 30 207 IPR000157 GO:0007165
Tsu04g01751 1148 Gene3D Ribonuclease Inhibitor 554 724 IPR032675 -
Tsu04g01751 1148 SUPERFAMILY L domain-like 518 838 - -
Tsu04g01751 1148 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 191 455 IPR027417 -
Tsu04g01751 1148 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 958 IPR044974 GO:0006952
Tsu04g01751 1148 SUPERFAMILY "Winged helix" DNA-binding domain 432 539 IPR036390 -
Tsu04g01751 1148 Gene3D - 193 357 IPR027417 -
Tsu04g01751 1148 SMART till_3 29 169 IPR000157 GO:0007165
Tsu04g01751 1148 SMART LRR_typ_2 873 897 IPR003591 -
Tsu04g01751 1148 SMART LRR_typ_2 898 921 IPR003591 -
Tsu04g01751 1148 SMART LRR_typ_2 732 755 IPR003591 -
Tsu04g01751 1148 Gene3D Ribonuclease Inhibitor 725 969 IPR032675 -
Tsu04g01751 1148 PRINTS Disease resistance protein signature 777 793 - -
Tsu04g01751 1148 PRINTS Disease resistance protein signature 303 317 - -
Tsu04g01751 1148 PRINTS Disease resistance protein signature 228 243 - -
Tsu04g01751 1148 PRINTS Disease resistance protein signature 396 410 - -
Tsu04g01751 1148 PANTHER - 28 958 - -
Tsu04g01751 1148 Gene3D - 362 445 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01751 Tsu-Chr4 18690376 18695662 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01751 761 927 WRKY Transcription Factor Family AT4G12020 32.335 6.25e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01751 - - gmx:100815486 1410.59