Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01750 ATGTTCCTGGACATTTCCCTACGATACGATACGATACAATTCAATACATACAAGTGCTTCACCATTTATATCTCCTCCAAGTTACCTTACCTTCATTCAACTTACACCAAAACAGTAAAAAAGATGGCTGCAAGTGCAAGTGCAAATGCAATTTCAGCTGTGTTTGGAGTTGCCTTCCTCTGTGCTCCTGTTAGAACCATGATGAATAAACTAACTTCAATAGAGTTTCTAGATTACACCAGCCACGAGAAACTGAACATCTCTCTCTTATCTAGAGAATTTCTCGTTTTTGAGCTTGTGCTAGATGATGCAGAGAAGAAGCAGTTCGAGAATCAAGATGTCAGACAATGGCTCCATGGGTTAAAAGATGCAATCTATGATGCAGAGGATTTGCTGAACCAAATTAGTTACGATTCCCTGCGATGCAAGGTCACAAATCAGGTGCGGAACTTCCTTTCATCTCCTTTTAACACCAATGGAGATATCAATTCCCAGATCGAGAAATTGTGTGAAAGACTGCAGCATTTTGCACAACAGGGAGAAACCCTTGGCTTGCAAAAGGCAGCAGATGTGGAGGTTTTTGGTAGACTTCCAACAACTTCAGTTTTAGTACAACAGGGGGAAACCCTTGGCTTGCAAAAGGCAGCAGATGTGGAGGTTTTTGGTAGACTTCCAACAACTTCAGTTTTAGTAAGTGAATCTGTCACTGTTGGTAGGAAGGATGATAAAAAGAAACTAATTAAGATGTTGCTATCAGACAGAGACACAGACAACAATGATATTGGTGTTGTCGCAATTTTAGGCATGGGAGGTCTCGGTAAAACGACCCTCGCTCGACTTCTGTACAATGATATAGAAGTCCAGAATCATTTTGATCTGAAAGCCTGGGTTTGTGTGTCTGAAGATTTTGATATTTTGGGAGTAACTAAATCTCTCCTTGAAGTTATCACTAAAAGAAACTGGGATAGCAATGATCCTGATATTCTTAGAGCTGAATTAAAGCAAATTTTGAGAAACAGAagatttttgtttgtgttggaTGATGTGTGGAGTGACGATTACTATGAGTTGGTAACTTCTTTTGCTGAAAAATATGGAAGCAAGGTGATCATCACAACACGTCTACAAACAGTTGCAGAGGTCGGACGTGCATCTCATATTTATAACTTAGATCCTCTATCGGATGAAGACTCTTGGTGTTTACTCTCAAAGTGTGCATTTGAAAGCAAGGGCTTTCACGTCGATGAGTATCCAACCCCAGAAGCAATTGGCCGAAGGATTGCTAGAAAGTGTCGCGGACTACCACTAGCTGCTAAAACACTTGGAGCACTTCTACGCTTAAATCTAGATGCAGAGCATTGGAAGGAAATTTTGAACAGTGACATATGGAAATTACCAGATGATGGTATCCTGCCAGCGTTGCGTTTGAGTTATTTATATCTTCCTTCTCACTTGAAAAGATGTTTCGcttattgttcaatttttccaAAGGATTATCAACTTGATAGGAAGCAACTGGTTTTGTTGTGGATGGCAGAAGGATTCATTGAGTGTTTTCTAGATGAGAAAGAAGCAGAGGTAATAGGTGATGAATGCTTTGTCGAATTGATATCTAGATCCTTCATTCAACAATCAAATGATGACGTTGATGGGAATTATTTTGCCATGCATGACGTTGTTAGTGACTTAGCTACGTTCGTATCAGGAGCAAGTTGTTGTCAGCTTGAATATGGAGGTAACAAATCTAAAAATGTTCGCCATTTATCATATAACCGTGAAAAACAAGACATTTCTAGGAATTGTGAGATTTTCCACGATTTCAAATGTCTACGAAGCTTCCTACCAATTGGCCCTTTGTGGGGACAAAATTGTATATCTAGACATGTGGTTTTTGATTTGCTACCCACACTGATGGGGTTGCGTGTGTTATCGTTATCAAAGTATAGAAATCTCACCAAACTACCAGATTCAATCGGCAATTTGACACAATTGAGGTATCTAGATCTCTCCAACACAAGAATCAAAAGCTTGCCTAATACAACATGTAATCTTTACAATTTGCAAACCTTGATTCTATCATATTGTTATCGTCTCACTGATTTGCCAATACATATTGGAATGTGGATCAATTTGCGTCACCTTGATATCAGTGGGACAAATATAAAGGAGTTGCCAAAGCAAATTATTGAACTAGAAAATCTTCGAACTCTAACTGTTTTTATAGTAGGTAGGGGTCAAGTTGGGATAAGTATCAAAGAGCTCAGGAAATTTCGACTACAAGGAAAACTTACCATCTTGAACCTCCATAATGTCATTGATTCCATGGAGGCATTTGCTGCCAACTTAAAAAGCAAAGAGAAAATTGAGGAGTTAGTGTTACAATGGGGTGAAAAAACTGAAGACCATCGAACAGAGAAAACTGTGCTTGATATGTTGCAACCatcaataaacttaaaaaaactGAGTATTGGCTACTATGGCGGAAAAAGCTTTTCAAGTTGGTTGGGAGATTCTTCGTTCTCTAACATGGTATATCTCAGCATCAGTAATTGTGAATATTGCCTTACACTTCCACCACTAGGGCAGCTATCTTCTCTGAAAGACCTAAGGATAGATGGTATGAGGATATTGAAGTCAATTGGCCCAGAGTTCTATGGCATGGTTGGGGAAGGTTCCAATTCTTCATGCCAACCATTTCCATCCCTACAGAATCTGCAATTTAAGAACATGTCAAGTTGGAAGGAATGGCTTCCCTTTGAAGGGGacaattttccttttccttGTCTGCAAACTTTGAGGTTATGCAAGTGCCCTGAATTGAGGGGTCATATGCCCAGGCACAGCCATCTTCCTTCCATAcaacaaattataataattgaTTGTGGCCGTCTCCTGGAAACACCATCCACTCTGCATTGGCTCTCAtccatagaaaataaaaatattctttacCTAAAATGA 2961 0.3833 MFLDISLRYDTIQFNTYKCFTIYISSKLPYLHSTYTKTVKKMAASASANAISAVFGVAFLCAPVRTMMNKLTSIEFLDYTSHEKLNISLLSREFLVFELVLDDAEKKQFENQDVRQWLHGLKDAIYDAEDLLNQISYDSLRCKVTNQVRNFLSSPFNTNGDINSQIEKLCERLQHFAQQGETLGLQKAADVEVFGRLPTTSVLVQQGETLGLQKAADVEVFGRLPTTSVLVSESVTVGRKDDKKKLIKMLLSDRDTDNNDIGVVAILGMGGLGKTTLARLLYNDIEVQNHFDLKAWVCVSEDFDILGVTKSLLEVITKRNWDSNDPDILRAELKQILRNRRFLFVLDDVWSDDYYELVTSFAEKYGSKVIITTRLQTVAEVGRASHIYNLDPLSDEDSWCLLSKCAFESKGFHVDEYPTPEAIGRRIARKCRGLPLAAKTLGALLRLNLDAEHWKEILNSDIWKLPDDGILPALRLSYLYLPSHLKRCFAYCSIFPKDYQLDRKQLVLLWMAEGFIECFLDEKEAEVIGDECFVELISRSFIQQSNDDVDGNYFAMHDVVSDLATFVSGASCCQLEYGGNKSKNVRHLSYNREKQDISRNCEIFHDFKCLRSFLPIGPLWGQNCISRHVVFDLLPTLMGLRVLSLSKYRNLTKLPDSIGNLTQLRYLDLSNTRIKSLPNTTCNLYNLQTLILSYCYRLTDLPIHIGMWINLRHLDISGTNIKELPKQIIELENLRTLTVFIVGRGQVGISIKELRKFRLQGKLTILNLHNVIDSMEAFAANLKSKEKIEELVLQWGEKTEDHRTEKTVLDMLQPSINLKKLSIGYYGGKSFSSWLGDSSFSNMVYLSISNCEYCLTLPPLGQLSSLKDLRIDGMRILKSIGPEFYGMVGEGSNSSCQPFPSLQNLQFKNMSSWKEWLPFEGDNFPFPCLQTLRLCKCPELRGHMPRHSHLPSIQQIIIIDCGRLLETPSTLHWLSSIENKNILYLK 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01750 986 Gene3D - 222 386 IPR027417 -
Tsu04g01750 986 SUPERFAMILY L domain-like 556 982 - -
Tsu04g01750 986 Gene3D Ribonuclease Inhibitor 594 985 IPR032675 -
Tsu04g01750 986 Gene3D - 392 476 IPR042197 -
Tsu04g01750 986 Pfam NB-ARC domain 240 459 IPR002182 GO:0043531
Tsu04g01750 986 ProSiteProfiles Leucine-rich repeat profile. 663 684 IPR001611 GO:0005515
Tsu04g01750 986 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 224 492 IPR027417 -
Tsu04g01750 986 Gene3D - 64 174 - -
Tsu04g01750 986 PRINTS Disease resistance protein signature 659 675 - -
Tsu04g01750 986 PRINTS Disease resistance protein signature 263 278 - -
Tsu04g01750 986 PRINTS Disease resistance protein signature 336 350 - -
Tsu04g01750 986 PRINTS Disease resistance protein signature 431 445 - -
Tsu04g01750 986 SMART LRR_typ_2 661 684 IPR003591 -
Tsu04g01750 986 SMART LRR_typ_2 708 731 IPR003591 -
Tsu04g01750 986 Gene3D - 477 565 IPR036388 -
Tsu04g01750 986 Pfam Rx N-terminal domain 86 147 IPR041118 -
Tsu04g01750 986 PANTHER OS05G0414200 PROTEIN 78 947 - -
Tsu04g01750 986 PANTHER DISEASE RESISTANCE PROTEIN RP 78 947 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01750 Tsu-Chr4 18685008 18688798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01750 260 442 WRKY Transcription Factor Family AT5G45050 29.016 4.81e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01750 - - mtr:MTR_3g032370 1006.13