Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01733 ATGAATCCATCGGGTATTTATAAAAGGGAATTTGTTTGTCATCGTGGTGGTATTGTTAAACACCGCAAAACTAATGAAGTGGACTGCCAAAGAAACCGAAAATCTTCAAGATGTAATTGTAGTGCAAAGATGCTGGTTGCTATCAGTACAATTGGCGTTGAGGAAAAATGGGTGGTTAAGTATCTCAACAATGATCACAACCATGAGTTATTGGATGACAAAGAGGTTCAATTTCTTCCTGCTTATCGTAGCATCCCAATTGTTGATCAAAGTCGTATAATGTTGTTGTCGAAAGCCGGTTGCTCTATAAGTCTTATCATGAGAGTGCTTGAATTAGAGAAAGAAATATGTACAGGCAATCTACCATTTCTAGAGAAGGatattagaaattttattcaatcTCAAAGTGGTATTGGTAAAGAAAGTGATGCTTCAGATGTTCTTAAATTGTGCAAAAGTTTGAAAGATATAGATGACGCATTCAAATATGAATTTACAATTGATGAAAGTAACAAATTGGAGCATATTATTTGGGCATTTGGTGATTCAATTCGAGCATATGAAGCTTTCGGAGATGTTGTAGTTTTTGATACCACATATAGAATAAATCGTTATGATATGCCACTTGGGATATGGGTTGGTGTTGATAACCATagaaatacaattttatttgGTTGTGTTCTATTGAGAGATGAGAAAATTTCTTCCTTCACATGGGCTTTAAAgACTTTCCTAGCTTTTGTTGAAGGAAAATATCCAAAAACTATTCTTACTGATCAAGATCCCGCACTTAAAGAAGCCATTGCAATAAAGTATCTTCCTTTTCGATGGagactgaagagtctttaa 849 0.331 MNPSGIYKREFVCHRGGIVKHRKTNEVDCQRNRKSSRCNCSAKMLVAISTIGVEEKWVVKYLNNDHNHELLDDKEVQFLPAYRSIPIVDQSRIMLLSKAGCSISLIMRVLELEKEICTGNLPFLEKDIRNFIQSQSGIGKESDASDVLKLCKSLKDIDDAFKYEFTIDESNKLEHIIWAFGDSIRAYEAFGDVVVFDTTYRINRYDMPLGIWVGVDNHRNTILFGCVLLRDEKISSFTWALKTFLAFVEGKYPKTILTDQDPALKEAIAIKYLPFRWRLKSL 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01733 282 PANTHER FAR1 DNA BINDING DOMAIN, ZINC FINGER, SWIM-TYPE, MULE TRANSPOSASE DOMAIN, FHY3/FAR1 FAMILY-RELATED 5 271 - -
Tsu04g01733 282 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 5 271 IPR031052 GO:0006355
Tsu04g01733 282 Pfam FAR1 DNA-binding domain 6 71 IPR004330 -
Tsu04g01733 282 Pfam MULE transposase domain 193 270 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01733 Tsu-Chr4 18411759 18412789 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu04g01733 MULE 6.1e-18 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01733 - - ccaj:109802755 410.609