Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01725 ATGGCGAACCCAGAAGCAAAGCTCGATACTTTCTTGCAGTGGCTACAGGCAAATGGAGTGGAGCTACGAGGTTGCAATATCAAGTACTGTGATTCCAGAAAAGGATTTGGCATTTTCTCTGATAAAGATGTTTCTGATGGGATTTTGTTGGTTGTTCCACTAGAGTTAGCAATTACTCCAATGAGGGTGTTGCAAGATCCTTTTCTAGGACCAGAATGTAGAGCATTGTTTGAAGAAGGAGATGTAGATGACAGGCTCTTAATGATGTTGTTATTGATGGTGGAACGTTTGCGTAAGGGTTCTCTATGGAAGCCGTACCTTGATATGCTTCCAACCACATTTGGAAATACACTTTGGTTTAGTGAAGAGGAACTTCAAGAGCTAAGAGGAACAACATTATACCGTGCAACTGAGTTACAGAAGAAAAGCCTGTTCAATTTGTATGAAACTAAAGTGAAGGATTTAGTGAAGAAACTTTTGAGTGACGGAAATTTGGAGATTGAGGTGTGCTTTGAAGATTTTCTTTGGGCAAATTCAGTATTTTGGAGCCGCGCTTTGAACATTCCATTGCCACGTTCTTATGTATTTCCTGAGATGCAAAATGTTCATCAGAGTTGCACTCCAGAAGCTGATGAAAAAGGAAGCCAGGTTATAAAATCTGACGATCTAACTAAGGAAACAACACATAGCACAGTGCAAGGAGACACTGTTTGGGTTGAGGGTCTTGTCCCTGGCATTGATTTTTGCAACCATGATCTGAAGCCAATAGCAACATGGGAAGTTGATGGAACCGGCTTAACAACAAGAGTTCCTGTCTCTATGTATCTTCTTTCGGCTGCCCAAAGTCCCTTGCAGAATGATCGAGAAATTTCCATTAGTTATGGCAACAAAGGAAATGAGGAACTTCTATATCTGTATGGTTTTGTCATTGATGGTAACAAAGATGACTACCTCATGGTCCATTATCCTACAGAAGCAATAAATACTATTTCTTTTTCAGAGTCTAAAGGCCAGCTTCTTGAAGTGCAGAATGCTGAAATGAGATGTCTTTTACCCAAAACTCTCCTGGATAATGGATTTTTTCCATTAGGCACCGAAAACAGCGGAGAAAATAAAAAGTGCAACAATGTTTGCAACTATAGTTGGAGTGGTCAGCGCAAAATTCCATCTTATGTAAACAAGCTTGTTTTTCCTGAAAAATTTATGGCCACCTTGAGGACCATAGCCATGCAAGAGGATGAGCTTTTCAAGGTTTCGTCAATGCTAGAAGAGCTTGTTGGACCTGAAGGGGAGAGACAATTATCAGATACAGATGTCCAATCAGCAATATGGGAGGTTTGCGGTGATTCTGGAGCTTTACAAGTGCTAGTTGATCTTCTTCATGTTAAGTTAATGGATCTTGAAGAGCATTCTGGAACTGATGAAAGTGACTCTGAATTGCTCAAGAAGGCTCTTATAATTGATAGCCAGGAAGATAGCAAACAAATGGCAAATGACTCGGAGGAAACAAAGTTGATGACTAGAAACAAATGGTCTGCTATAGTATATAGACGAGGTCAAAAGCAGCTAACTCGATTATTCTTGAAAGAAGCAGAACATGCTCTGCAGTTATCGATGAACGAAGAGATGAGTGTTCCTTAA 1641 0.4016 MANPEAKLDTFLQWLQANGVELRGCNIKYCDSRKGFGIFSDKDVSDGILLVVPLELAITPMRVLQDPFLGPECRALFEEGDVDDRLLMMLLLMVERLRKGSLWKPYLDMLPTTFGNTLWFSEEELQELRGTTLYRATELQKKSLFNLYETKVKDLVKKLLSDGNLEIEVCFEDFLWANSVFWSRALNIPLPRSYVFPEMQNVHQSCTPEADEKGSQVIKSDDLTKETTHSTVQGDTVWVEGLVPGIDFCNHDLKPIATWEVDGTGLTTRVPVSMYLLSAAQSPLQNDREISISYGNKGNEELLYLYGFVIDGNKDDYLMVHYPTEAINTISFSESKGQLLEVQNAEMRCLLPKTLLDNGFFPLGTENSGENKKCNNVCNYSWSGQRKIPSYVNKLVFPEKFMATLRTIAMQEDELFKVSSMLEELVGPEGERQLSDTDVQSAIWEVCGDSGALQVLVDLLHVKLMDLEEHSGTDESDSELLKKALIIDSQEDSKQMANDSEETKLMTRNKWSAIVYRRGQKQLTRLFLKEAEHALQLSMNEEMSVP 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01725 546 Pfam SET domain 35 295 IPR001214 GO:0005515
Tsu04g01725 546 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 4 542 - -
Tsu04g01725 546 Gene3D set domain protein methyltransferase, domain 1 5 309 - -
Tsu04g01725 546 PANTHER SET DOMAIN-CONTAINING PROTEIN 4 542 - -
Tsu04g01725 546 SUPERFAMILY SET domain 7 313 IPR046341 -
Tsu04g01725 546 CDD SET_LSMT 31 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01725 Tsu-Chr4 18325585 18332641 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Tsu04g01725 SET 3.3e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01725 - - gmx:100777394 888.641