Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01724 ATGGATGAGAGAGGTGGAAATAGCAACACAAGGCTCCTCAATGAAGATAGTGATGGTGGTGATTTAGAAAGGAAGAGTGAAAGACCAAAAGAACCTTGGAGAGGAGAATATGTAAAGAGCATAGTTTATGGAGGGCTTGATGCCATTATAACTTGCTTTTCTCTCATTTCCTCAATCTCAGCTAGTAGTAGTTCCTCTGGGTATGTGTTGGTTCTTGGGTTTGCTAACCTAGTAGCAGATGCAATATCAATGGGATTTGGAGACATAGTGTCTGCTAGCTCTGAGAGGGATGTGATCATTGAGGAAAGGAGAGTGACAGAGTGGGATGTTTTAAATAGCAGGGGAAATGAACAAAGAGAGTTGGTAAGATACTATCAATCTCTTGGGATGGACTACAATGATGCAACTGCGGTTGTGAACATATTTACAAAATACAATGACATACTGGTGGACCAAAGAATGGTAGCTGACAAAGGAATGCTATCAGCAGACCAAGAAGTGAAGCCTTGGAAGAATGGCCTCATCACATTTACATCTTTCATGATCTTTGGCTCAATACCTCTGCTATCTTTCATCATCCTTATACCATTTACAGATAGCGATTCGGTTAAGTTTGTAAGTGCATGCCTTGTTTCAGCACTTGGTCTTGCTCTTCTTGGTGTTGCAAGGGGAAAGATTGCTGGTCAAAACATGGTGTTAACCACAGCTATTACTGTTTTCAGTGGTGTCATAGCAGGAGCTGCTGCTTATTTAGTAGGGTGGTTGCTAAAGAATATTGCAGGAGTAGAAGGTTATAAATGCACTTGA 807 0.4114 MDERGGNSNTRLLNEDSDGGDLERKSERPKEPWRGEYVKSIVYGGLDAIITCFSLISSISASSSSSGYVLVLGFANLVADAISMGFGDIVSASSERDVIIEERRVTEWDVLNSRGNEQRELVRYYQSLGMDYNDATAVVNIFTKYNDILVDQRMVADKGMLSADQEVKPWKNGLITFTSFMIFGSIPLLSFIILIPFTDSDSVKFVSACLVSALGLALLGVARGKIAGQNMVLTTAITVFSGVIAGAAAYLVGWLLKNIAGVEGYKCT 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01724 268 Pfam VIT family 39 253 IPR008217 GO:0005384|GO:0030026
Tsu04g01724 268 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 24 261 IPR008217 GO:0005384|GO:0030026
Tsu04g01724 268 PANTHER CCC1 FAMILY PROTEIN-RELATED 24 261 - -
Tsu04g01724 268 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01724 Tsu-Chr4 18321393 18324112 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01724 7 98 Nodulin-like Gene Family AT3G25190 28.421 1.39e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01724 K22736 - gmx:100776858 362.073