Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01699 ATGAACATGATGAGAAGATTAAAAAGCATTGCTTCTGGTAGAACCTCTATTTCATCAGATCCTGGTGGGGATTCTACCATAAAAAGAGCCAAGTTTGATCCAGAAAATGGGGAAACAAATTGTGTTGAAAGAGTCGGAAGTAACAAGGATAAGTATGTAGATGCATCCCAAGGAGATGCATCTAATGTTTCTGCGGTGGCTAAAACCGAGAAGTCAGGTTGTGATCAGCTTCCAAAGGAATTAAACGAAATGAAAATTAAAGATGATAAAAGCAAAAACAACAACGAAAAGGATATGGAGGCAACTATTGTGAATGGAAATGGAACGGAAACTGGTCAAGTAATTACAACTTCTATTGGTGGTCGAGATGGACAGCCAAAGAGGATAATCTCTTATGCGGCAGAGCGTGTTGTTGGTACCGGTTCTTTTGGTGTTGTTTATCAGGCTAAGTGCGTTGAAACTGGCGAATCCGTTGCTATAAAGAAAGTCTTACAAGACAAGAGATATAAAAATAGGGAACTCCAGGTTATGCGTATGCTTGAACATACTAATGTTCTTAAACTAAAGCACTGTTTCTACTCAACGGCTGAAAAAGAAGATGTGTACCTTAACTTAGTTTTGGAGTACGTACCTGAAACTGTCTACAGAGTTTCAAAGCACTATGTCAGGATGCACCAACACATGCCTATAATTTACGTGCAACTATATATGTATCAGATATGCCGTGGTTTAAATTATATGCATCATGTGGTTGGAGTCACTCACCGTGACATCAAACCTCAGAATCTATTGGTTAATCCTGCGACTCATCAGTTAAAGATATGTGATTTTGGTAGTGCAAAAATGTTGGTGCCTGGTGAACCCAACATATCATACATATGCTCACGGTATTATAGAGCTCCTGAACTTATATTCGGTGCAACTGAATACACAACTGCTATTGATGTTTGGTCTGCTGGCTGTGTTTTGGCTGAGCTTCTTCTTGGACAGCCAATTTTTCCTGGAGAGAGTGGCGTTGATCAGTTGGTAGAGATCATTAAGATTTTGGGAACACcaacaagagaagaaattaaGTGCATGAATCCAAATTACACTGAATTCAAGTTTCCTCAGATTAAAGCTCACCCATGGCACAAGATCTTTCACAAAAACATGCCTTCGGAAGCAGTGGACCTTGTGTCGAGGATGCTTCAGTATTCACCAAATCTACGTTGCACAGCTTTGGAAGCATGTTCACATTCTTTCTTTGATGATCTCAGAGACCCAAATGTACGCTTACCGAATGGGCAAGAACTTCCCCCTTTGTTTGATTTTACAGCTCAAGAGTTGGCAGGCGCATCTGATGAGTTGCGTCGGCGTCTAATTCCTGAGCATGCAAGgagttga 1386 0.3997 MNMMRRLKSIASGRTSISSDPGGDSTIKRAKFDPENGETNCVERVGSNKDKYVDASQGDASNVSAVAKTEKSGCDQLPKELNEMKIKDDKSKNNNEKDMEATIVNGNGTETGQVITTSIGGRDGQPKRIISYAAERVVGTGSFGVVYQAKCVETGESVAIKKVLQDKRYKNRELQVMRMLEHTNVLKLKHCFYSTAEKEDVYLNLVLEYVPETVYRVSKHYVRMHQHMPIIYVQLYMYQICRGLNYMHHVVGVTHRDIKPQNLLVNPATHQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDVWSAGCVLAELLLGQPIFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKNMPSEAVDLVSRMLQYSPNLRCTALEACSHSFFDDLRDPNVRLPNGQELPPLFDFTAQELAGASDELRRRLIPEHARS 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01699 461 CDD STKc_GSK3 130 419 IPR039192 -
Tsu04g01699 461 SUPERFAMILY Protein kinase-like (PK-like) 131 441 IPR011009 -
Tsu04g01699 461 ProSiteProfiles Protein kinase domain profile. 132 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g01699 461 PANTHER SHAGGY-LIKE KINASE 6 461 - -
Tsu04g01699 461 Gene3D Transferase(Phosphotransferase) domain 1 212 460 - -
Tsu04g01699 461 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 6 461 - -
Tsu04g01699 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
Tsu04g01699 461 MobiDBLite consensus disorder prediction 26 41 - -
Tsu04g01699 461 Gene3D Phosphorylase Kinase; domain 1 116 211 - -
Tsu04g01699 461 ProSitePatterns Protein kinases ATP-binding region signature. 138 162 IPR017441 GO:0005524
Tsu04g01699 461 MobiDBLite consensus disorder prediction 1 41 - -
Tsu04g01699 461 Pfam Protein kinase domain 132 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g01699 461 MobiDBLite consensus disorder prediction 9 23 - -
Tsu04g01699 461 SMART serkin_6 132 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01699 Tsu-Chr4 18019404 18023449 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01699 138 419 Core Cell Cycle Gene Families AT1G76540 36.949 3.99e-56 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Tsu04g01699 Pkinase 1.9e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01699 K00924 - gmx:100786458 809.675