Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01696 ATGTCTGAGGTTCGAATCCCGGTCACTCTAGTTTGTGTATCTTCCAACATAGgCATCATGATGTTTAGTTTTCTATTTCTAGCTCTTTTGGCGACAAATTCAATGGCTGTCGCGGCGCAGCAAACATATATAGTACACATGGACAAAACCAAAATTGAAGCCTCAATTCATTCTCAAGACAGCACAAAACCATGGTCTGAATCAATCATTGATTTCATTTCTCAAGCttcaaaagaagaagaacaagaagaagagaTTTTATCATCACCTCAGCTTTTATATGCCTATGAAACCAACATGTTTGGTTTTGCAGCCACACTTTCTGAGAAACAACTTAAACACTTAAACCAAGTTGATGGTTTCCTTTCAGCCATACCTGATGAACTTTTAACCCTCCACACAACATACACGCCGCATTTTCTTGGCCTAACTAATGGAAAAGGACTTTTGAGTGCTTCAAATTTGGCCTCTGATGTTATCATCGGTGTCCTTGATTCCGGAATATGGCCTGAACACATCAGTTTCAAAGACTCCGGCTTTTCTACGATACCTCCTAAATGGAAAGGTATTTGTGAAAATGGCACCAAATTCTCATCCTCAAACTGTAACAAGAAACTCATTGGTGCAAGATACTATTTTAGAGGGTACGAAAAATTCATCGGAAAAATCAACGAAACAACTGATTATCGTTCTGCTAGAGACTCTCAAGGTCATGGAACTCACACTGCCTCGACTGCAGCTGGTAATGTGGTTCAAAAAGCAAGCATTTTTGGACTTGCTAAAGGTTCTGCAAGTGGAATGAGGTATACTTCAAGAATTGCGGCGTATAAAGTGTGTTGGCTTTCTGGCTGTGCAAATTCGGACGTATTAGCAGCAATGGACCAAGCAGTTTCTGATGGTGTTGATGTACTTTCACTCTCTTTAGGAAGTattccaaaaccattttataaTGATAGTATTGCTATAGCTTCATTTGGAGCAACAAAAAACGGCGTTTTTGTTTCTTGCTCCGCAGGCAACTCAGGCCCTTTTGCATCAACAGTTGGAAACGGCTCGCCATGGATCATGACAGTTGCTGCTAGCTACATTGACAGAACTTTTCCAACAAAAGTCAAACTCGGAAACTCAAAAACTTTTGAAGGCACATCTTTGTACCAaggaaaaaatcaaacaaaccaacaaTTTCCACTTGTGTATGGTAAAACAGCAGGTAAAAAGAGAGAAGCAGTGTTTTGCACAAAAAACTCACTTGataaaaaacttgtttttggaaaaatagtTGTTTGTGAAAGAGGAATCAATAGCAGAACAGAAAAAGGAGAGGAAGTGAAAAAATCAGGTGGATATGGAATGATACTACTTAACTCAGAAAATCAAGGTGAAGAGCTTCTTTCTGATGCTCATGTTTTACCAGCTACTTCATTAGGTGCTTCAGCAGGTAAAATCATTAGAAGCTACATTAACACTGTTAAAAAACCAACAGCTTCAATTTCATTTCTAGGAACAAGATACGGTAACGTTGCGCCAATAATGGCAGCATTTTCATCTAGAGGACCAAATATAATAGGACAAGATGTTATCAAACCAGATGTAACTGCACCTGGTGTTAACATCTTAGCTGCATGGCCATCAAACACTAGTCCAACTATGGTCAAAAGTGACAAAAGAAGAGTCCTATTTAACATTGTTTCAGGTACATCAATGTCTTGTCCTCATGTTAGCGGCATAGCGGCGTTGATTAAATCTGTTCATAAAGATTGGTCACCTGCAATGATCAAATCATCACTTATGACAACAGCTTACACATTGAACAATAAAAACCTTCCGATTTCAGACCTTGCTTCGAATAACTCGGCTTCTGCTAACCCTTTTGCATTTGGTTCAGGACATGTTAATCCAGAAAGTGCTTCTGATCCTGGATTAGTCTATGATATTAACACTAATGACTATTTGAATTACTTTTGTAGCCTTAATTTTACTTCATCAGAGATTACAATATTGACAAAAACAAACTTCAAATGTTCTAAGAAACCACTTTTTCAAGTTGGTGACTTGAATTATCCTTCATTTGCTGTTTTGTTTAGTAGAACAGTACATAATGTGACATACAAAAGAGTTGTTACAAATGTTGGAAAATCAGAAAGTGCTTATTATGATGTTAAAGTTGAGCAACCTAATGGAGTTATTGTTAGTGTTGAACCAAGGAAATTGAAGTTTGAAAAATTGGGTCAGAAATTAAGCTATAAAGTTACATTTTTAGCAGTTGGAAAAGCAAGAGTTATTGGTACTTCATCATTTGGATCACTCATTTGGGTATCTCATAAATATAAGGTTAGAAGTCCTATTGCAGTGACATGGCAATAG 2364 0.3625 MSEVRIPVTLVCVSSNIGIMMFSFLFLALLATNSMAVAAQQTYIVHMDKTKIEASIHSQDSTKPWSESIIDFISQASKEEEQEEEILSSPQLLYAYETNMFGFAATLSEKQLKHLNQVDGFLSAIPDELLTLHTTYTPHFLGLTNGKGLLSASNLASDVIIGVLDSGIWPEHISFKDSGFSTIPPKWKGICENGTKFSSSNCNKKLIGARYYFRGYEKFIGKINETTDYRSARDSQGHGTHTASTAAGNVVQKASIFGLAKGSASGMRYTSRIAAYKVCWLSGCANSDVLAAMDQAVSDGVDVLSLSLGSIPKPFYNDSIAIASFGATKNGVFVSCSAGNSGPFASTVGNGSPWIMTVAASYIDRTFPTKVKLGNSKTFEGTSLYQGKNQTNQQFPLVYGKTAGKKREAVFCTKNSLDKKLVFGKIVVCERGINSRTEKGEEVKKSGGYGMILLNSENQGEELLSDAHVLPATSLGASAGKIIRSYINTVKKPTASISFLGTRYGNVAPIMAAFSSRGPNIIGQDVIKPDVTAPGVNILAAWPSNTSPTMVKSDKRRVLFNIVSGTSMSCPHVSGIAALIKSVHKDWSPAMIKSSLMTTAYTLNNKNLPISDLASNNSASANPFAFGSGHVNPESASDPGLVYDINTNDYLNYFCSLNFTSSEITILTKTNFKCSKKPLFQVGDLNYPSFAVLFSRTVHNVTYKRVVTNVGKSESAYYDVKVEQPNGVIVSVEPRKLKFEKLGQKLSYKVTFLAVGKARVIGTSSFGSLIWVSHKYKVRSPIAVTWQ 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01696 787 ProSitePatterns Serine proteases, subtilase family, serine active site. 565 575 IPR023828 -
Tsu04g01696 787 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.1 32 787 - -
Tsu04g01696 787 Pfam Subtilase family 157 611 IPR000209 GO:0006508|GO:0008236
Tsu04g01696 787 SUPERFAMILY Subtilisin-like 132 641 IPR036852 GO:0004252|GO:0006508
Tsu04g01696 787 Gene3D - 654 786 - -
Tsu04g01696 787 Pfam PA domain 396 482 IPR003137 -
Tsu04g01696 787 Gene3D Peptidase S8/S53 domain 158 650 IPR036852 GO:0004252|GO:0006508
Tsu04g01696 787 ProSiteProfiles Serine proteases, subtilase domain profile. 138 637 - -
Tsu04g01696 787 Gene3D - 364 504 - -
Tsu04g01696 787 Pfam Fibronectin type-III domain 684 784 IPR041469 -
Tsu04g01696 787 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 30 133 IPR037045 -
Tsu04g01696 787 CDD Peptidases_S8_3 130 601 IPR034197 -
Tsu04g01696 787 Pfam Peptidase inhibitor I9 42 133 IPR010259 -
Tsu04g01696 787 PRINTS Subtilisin serine protease family (S8) signature 564 580 IPR015500 -
Tsu04g01696 787 PRINTS Subtilisin serine protease family (S8) signature 156 175 IPR015500 -
Tsu04g01696 787 PRINTS Subtilisin serine protease family (S8) signature 234 247 IPR015500 -
Tsu04g01696 787 CDD PA_subtilisin_like 371 497 - -
Tsu04g01696 787 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 787 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01696 Tsu-Chr4 17990176 17997393 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01696 40 787 Subtilisin-like Serine Gene Family AT1G01900 55.984 0.0 833
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01696 - - gmx:100790006 1165.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g01696 04 17990176 17997393 Tsu04g01696 04 17990176 17997393 ECH