Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01693 ATGGTTTTACAAAAACTCACCAAATCCTTTCCTTTTCTTTGCCTTCAATTACTTCTGATTTTTATAAACATTGCTTCTTCAGTTAATGGAGTTGAACAAAAGAATTTTTACATTGTTTTCTTGGGAGATCATTCTGTAAGCAAAGACATTACACTTGAGACTCATTTAAATGTTCTATCTTCTGTGAAGGGGAGCTATGATGAAGCCAAAGAGTCCATTGTATATAGCTACACAAAGAGCTTCAATGCATTTGCTGCTAAACTGTCTGAAGATGAAGCCAATAAGTTATCTGCCATGGATGAAGTGCTTTTGGTGTTTAAAAATCGGTATCGTAAGTTACACACAACAAGATCATGGAACTTCATTGGTTTACCTCTGACTGCTAAGAGAAGATTGAAATTAGAACGCGACATAGTTGTTGCTCTTTTTGACACAGGGATCACGCCGGAGTCGAAAAGCTTCAAGGATGATGGGTTAGGTCCTCCACCAGCAAGATGGAAAGGAGCTTGTGGTCATTATGCTAATTTCTCAGGCTGCAACAACAAGATCATAGGAGCCAAATACTTCAAGGCTGATGGAAACCCTGATCCATCTGACATATTATCGCCGATAGATGTTGATGGTCATGGAACTCATACAGCATCAACAGCTGCAGGAGATTTAGTTCCAAATGCAAGTCTCTTTGGGTTGGCCAACGGAACTTCACGTGGAGCAGTGCCATCGGCTAGGTTGGCAATTTACAAAGTCTGCTGGTCATCTACTGGATGTGCAGACATGGACATACTTGCTGCATTTGAAGCTGCTATACATGATGGTGTGGATGTCATATCAATTTCCATAGGTGGAGGAAGCCCTGATTATGCTCATGACTCTATATCAATTGGTGCATTCCATGCCATGAAGAAAGGTATAATCACTGTTGCATCAGCTGGAAATGATGGTCCAAGTATGGGAAGCGTTACAAATACTGCACCATGGATTGTGACAGTAGCTGCTAGTGGCATTGACAGAGCTTTCAAGAGCATAATACAGTTAGGAAGTGAAAAAAATGTTTCTGGTGTAGGAATTAGCTGTTtcaatctaaaacaaaaacagtACCCTATTATTAATGCGATTGATGCCGCAAAAGACTCGAAAAGCAAGGAAGATGCTAAATTCTGCAACTCAGGCTCTTTACAGGCAAATAAAGTGAAGGGAAAGTTTGTTTACTGCTTAGGATCATGGGGCACTGAAGCTACTGTTAAAGAAATCGGAGGAATTGGTACTGTAATAGAATATGACAATTATCCTGATGTTGCTCAAATTTTCATTGCTCCTGCTACTGTTGTGAATCATAGCATAGGTGAAACTGTTACCAATTATATAAAATCTACAAGATCACCATCAGCAGTGATATACAAGAGCCATGAAGAAAAAGTTCCAGCTCCATTTGCTGCTACATTCTCATCTAGAGGACCAAATCCAGGATCCAAAAATGTCCTCAAGCCTGACATTGCAGCTCCTGGCATTGACATCTTGGCATCTTATACTCTTAGGAAATCACTCACCGGCTTGGATGGTGATACACAATTTTCAGAATTTTCTCTAATATCGGGAACTTCCATGGCATGTCCGCATGTTGCTGGCGTAGCAGCATATGTGAAATCATTCCATCCCAATTGGACTGCTGCTGCAATCAGATCTGCAATTATCACCACCGCCAAACCTATGAGCAGAAGAATTAACAATGAAGCAGAATTTGCCTTTGGTTCTGGTCAACTAAACCCAACAAAAGCACTAAATCCTGGTTTAGTCTATGACATGGATGAATTTGGTTATATCCAATTTCTATGCCATGAAGGTTACAAAGGTTCAAGTTTATCAGCACTAGTTGGTTCACCTATAAACTGCTCCTCTTTACTTCCTGGATTTGGCCATGATGCTATCAACTATCCAACCATACAACTTAGCTTGGAAAGCAAGAAAGACATAAATATCGGCGTTTTTAGAAGAACAGTTACCAACGTAGGTCCTGTTCCAGTTATCTATAATGCTACTATTAGATCACCAAAAGGAGTTGAAATTATAGTGAAGCCAAGTTTACTTTGTTTTGATAGAAAAATGCAGAAGAGAAGCTTTGAAGTAGTTGTGAAAGTTAAATCTATTGCAAGTATGGAGATTCTATCAGGTTCACTTATATGGAGAAGTCCACGTTACATTGTTAGGAGTCCTATAGTTATTTACAAGCCATAA 2232 0.3925 MVLQKLTKSFPFLCLQLLLIFINIASSVNGVEQKNFYIVFLGDHSVSKDITLETHLNVLSSVKGSYDEAKESIVYSYTKSFNAFAAKLSEDEANKLSAMDEVLLVFKNRYRKLHTTRSWNFIGLPLTAKRRLKLERDIVVALFDTGITPESKSFKDDGLGPPPARWKGACGHYANFSGCNNKIIGAKYFKADGNPDPSDILSPIDVDGHGTHTASTAAGDLVPNASLFGLANGTSRGAVPSARLAIYKVCWSSTGCADMDILAAFEAAIHDGVDVISISIGGGSPDYAHDSISIGAFHAMKKGIITVASAGNDGPSMGSVTNTAPWIVTVAASGIDRAFKSIIQLGSEKNVSGVGISCFNLKQKQYPIINAIDAAKDSKSKEDAKFCNSGSLQANKVKGKFVYCLGSWGTEATVKEIGGIGTVIEYDNYPDVAQIFIAPATVVNHSIGETVTNYIKSTRSPSAVIYKSHEEKVPAPFAATFSSRGPNPGSKNVLKPDIAAPGIDILASYTLRKSLTGLDGDTQFSEFSLISGTSMACPHVAGVAAYVKSFHPNWTAAAIRSAIITTAKPMSRRINNEAEFAFGSGQLNPTKALNPGLVYDMDEFGYIQFLCHEGYKGSSLSALVGSPINCSSLLPGFGHDAINYPTIQLSLESKKDINIGVFRRTVTNVGPVPVIYNATIRSPKGVEIIVKPSLLCFDRKMQKRSFEVVVKVKSIASMEILSGSLIWRSPRYIVRSPIVIYKP 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01693 743 Pfam Peptidase inhibitor I9 37 114 IPR010259 -
Tsu04g01693 743 ProSiteProfiles Serine proteases, subtilase domain profile. 118 593 - -
Tsu04g01693 743 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.14 36 741 - -
Tsu04g01693 743 CDD PA_subtilisin_like 343 465 - -
Tsu04g01693 743 Pfam Subtilase family 136 584 IPR000209 GO:0006508|GO:0008236
Tsu04g01693 743 Gene3D Peptidase S8/S53 domain 137 603 IPR036852 GO:0004252|GO:0006508
Tsu04g01693 743 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 36 741 IPR045051 -
Tsu04g01693 743 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 114 IPR037045 -
Tsu04g01693 743 Gene3D - 336 471 - -
Tsu04g01693 743 ProSitePatterns Serine proteases, subtilase family, serine active site. 532 542 IPR023828 -
Tsu04g01693 743 SUPERFAMILY Subtilisin-like 113 597 IPR036852 GO:0004252|GO:0006508
Tsu04g01693 743 CDD Peptidases_S8_3 112 567 IPR034197 -
Tsu04g01693 743 Pfam Fibronectin type-III domain 642 740 IPR041469 -
Tsu04g01693 743 Gene3D - 610 742 - -
Tsu04g01693 743 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Tsu04g01693 743 PRINTS Subtilisin serine protease family (S8) signature 205 218 IPR015500 -
Tsu04g01693 743 PRINTS Subtilisin serine protease family (S8) signature 531 547 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01693 Tsu-Chr4 17964036 17969569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01693 34 581 Subtilisin-like Serine Gene Family AT4G00230 65.574 0.0 733
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01693 - - mtr:MTR_7g075890 1284.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g01693 04 17964036 17969569 Tsu04g01693 04 17964036 17969569 ECH
Tsu08g01216 08 13441633 13446520 Tsu04g01693 04 17964036 17969569 PCT