Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01679 ATGGAGTACCAAACACTTCTACTAGGAATTACCTTTGTAAGTGCAACCATTCTCATCttcatttttagaaaattatacCAAACCCAAAATTCTACAAAACTTCCACCAGGGCCACACCCACTTCCCATATTAGGAAACATTTTAGAACTTGGCAAAAATCCACACAAGACACTCACAAAACTCTCTCAAATATATGGACCAATCATGACACTAAAACTAGGAACAATAACAACCATAGTAATCTCATCACCACAACTAGCCAAACATGTCTTACATGAAAATTcccaaatattttctaataggACAATCCCTCACTCTGTCTATGCAATTGAGCATTACAAATTCTCAATCACATGGCTTCACCACCTATCAACATCATGGAAGAAACTTAGGAGAGTTTGTGCTACAAAAATATTCTCTACAAAACATCTTGACTCCACAAAAGTCATTAGACAACAAAAGTTGAAAGAATTATTGGATTATGTGAATGAAAAATGCAACAAAGGTGAGGTTTTTGACATTGGTAAAGCTGTTTTTATAACAATGcttaattcaatttcaaacacTTTGTTCTCTATGGATTTATCTCAAATCAAACATGATGAAAAGTCTCAAGAGTTTGAGAATATTGTTTGGGGTATCATGGAAGAAGCTGGTAAGCCTAATATTTCAGATTTCTTTCCAATTCTTCGTCCCTTAGATCCACAAGGTTTGTATGCAAGGATGACCATTCATATGAAGAAGTTGTGTGAGATTTTTGATGGAATTATTGAAGATAGAATTAGGTCAAGAGCTTCCAAAGTTGATTATGAGGTTTCCAATGATGTGTTAGATTCTCTTCTTAACAATATTGGTGACACTAGTTCTGAATTGAGCCGCAATGAAATGGTGCATTTGTTTCTGGATATATTTGTTGGTGGAATTGATACAACTTCAAATACAATTGAATGGATTATGGCTGACTTATTACGTCACCCCGAAAAATTAACAAAAGCAAGAAAAGAATTATGTGAAGTAATTGACAAAGATGAAATAATTGAAGAATCACATATTTCCAAGTTACCTTACTTACAAGCTATTGTGAAGGAATCATTTCGATTGCACCCTACAGTTCCATTATTGGTACCCCACAAATGTGATGAAAATGTGAACATATTAGGCTTCAATGTGCCAAAAAATGCAGAAGTGTTGATCAATGTGTGGGCCATGGGAAGAGATCCAACCATTTGGGAAAATCCAAATATGTTCATGCCAGAAAGATTTTTTGAGTGTGATATAAATTATAAGGGTAACAATTTTGAGCTTATACCCTTTGGGACAGGCAAAAGAATTTGTCCAGGATTACCATTAGCTCATAGGGTTGTACATTTAATAGTGGCATCCCTTTTACGCAATTTTGAATGGACACTTGCCGATGGGCTAATGCCAGAAGACATGAATATGGATGAACAATTTGGATTATCCTTAAAGAGGGTCCAACCTCTTCGAGTTCAAGCTACATAA 1503 0.3413 MEYQTLLLGITFVSATILIFIFRKLYQTQNSTKLPPGPHPLPILGNILELGKNPHKTLTKLSQIYGPIMTLKLGTITTIVISSPQLAKHVLHENSQIFSNRTIPHSVYAIEHYKFSITWLHHLSTSWKKLRRVCATKIFSTKHLDSTKVIRQQKLKELLDYVNEKCNKGEVFDIGKAVFITMLNSISNTLFSMDLSQIKHDEKSQEFENIVWGIMEEAGKPNISDFFPILRPLDPQGLYARMTIHMKKLCEIFDGIIEDRIRSRASKVDYEVSNDVLDSLLNNIGDTSSELSRNEMVHLFLDIFVGGIDTTSNTIEWIMADLLRHPEKLTKARKELCEVIDKDEIIEESHISKLPYLQAIVKESFRLHPTVPLLVPHKCDENVNILGFNVPKNAEVLINVWAMGRDPTIWENPNMFMPERFFECDINYKGNNFELIPFGTGKRICPGLPLAHRVVHLIVASLLRNFEWTLADGLMPEDMNMDEQFGLSLKRVQPLRVQAT 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01679 500 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 499 - -
Tsu04g01679 500 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g01679 500 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g01679 500 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g01679 500 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g01679 500 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g01679 500 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g01679 500 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g01679 500 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g01679 500 Gene3D Cytochrome P450 21 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g01679 500 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 499 - -
Tsu04g01679 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Tsu04g01679 500 SUPERFAMILY Cytochrome P450 30 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g01679 500 Pfam Cytochrome P450 35 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g01679 500 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g01679 500 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g01679 500 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g01679 500 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01679 Tsu-Chr4 17734203 17739980 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01679 4 495 Cytochrome P450 AT2G45550 46.169 2.39e-162 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01679 - - gmx:100810526 683.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g01679 04 17734203 17739980 Tsu05g00127 05 911851 913688 ECH
Tsu04g01679 04 17734203 17739980 Tsu04g01679 04 17734203 17739980 ECH