Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01676 ATGCCTAGAAAGGGAATGCTTTTTGATAACATCAATGATGCTTGGAAGTTTTGGATTGATTATGGGGGAAGAATTGGGTTTGGAGTGAGAAAACAATATACGCACCATAGCAAGGACGGCTCAGGCTTAGCTACTTCTTGTAGGTTCGTGTGTTGCAAAAAAGGCTTACGAAAACCGGACAAACGATATTTTAAAACAATCAAGCCAAGACCAGAGACGAGAATTGGCTGTCAAGCAAGGATAGGTCTTAAGAATATGGGTGAAAATTGGATGGTTCATGATTTTGTGGCGGAACATAACCATATGTTACACACACAAGAAACAACTCATATGTTGTCATCTCAACGAAAAGTTTCAGAAATTCACTGCCAACAAATTGATTTAGCAGATGACGTTGGTCTTCAACAAAGGAGTTCATTTGATTTGATGACTAAAGAAGTGGGTGGCAGAACCAACTTGGGATTTACACGCCTTGATCAAAAGAATTATCtcaaaaaaagaaggaaaagcaGTTTAGTAAATGGGTAA 528 0.3731 MPRKGMLFDNINDAWKFWIDYGGRIGFGVRKQYTHHSKDGSGLATSCRFVCCKKGLRKPDKRYFKTIKPRPETRIGCQARIGLKNMGENWMVHDFVAEHNHMLHTQETTHMLSSQRKVSEIHCQQIDLADDVGLQQRSSFDLMTKEVGGRTNLGFTRLDQKNYLKKRRKSSLVNG 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01676 175 Pfam FAR1 DNA-binding domain 16 104 IPR004330 -
Tsu04g01676 175 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 2 132 - -
Tsu04g01676 175 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 2 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01676 Tsu-Chr4 17719922 17720449 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu04g01676 FAR1 1.2e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01676 - - lja:Lj4g3v0620710.1 272.322