Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01659 ATGGAGGATAATGAATGTCAACCAGTTGAAATTGACAAGTTCATAGATATTTTTCTTGGTCAAGTTGTGCACAGCAAGGATGAAGCTTATGACTTATACCAAGAACATGGCTTCAAAATGGGTTTTAGTGTAAGAAAAGGGAAGGAACTGTATTATGATAATGTTAAAAAGAACACACGTTTGAAAGATTTTTATTGTTCCAAACAAGGGTTTACGAACAATGAACCTGAAGCTGAAATCGCAAGTAAAGTCGCTTATCAAAGGACTGATTCAAGAACAAATTGTAAAGTGATGGTGCGATTTAATGTTAGTAAGGATGGAGAATGGCGAATTACTAAGCTTATAATGGATCACAACCATGAATTTGTGCCGCTTGAGCAAATGCATCTATTACACTCTATGAGAAAAGTATCAGAAGCCAAAGGAGGTCTCATAAAGTCTATGGTGAATGCTGGTATGAAAGTTACTAATGTCTGGAATTATTTGGGTGATGAAGTTGGCAGATATGATAAGCTTGGTATGACGATGAAAGATATGCATAATTTTGTCTACACTTAA 558 0.353 MEDNECQPVEIDKFIDIFLGQVVHSKDEAYDLYQEHGFKMGFSVRKGKELYYDNVKKNTRLKDFYCSKQGFTNNEPEAEIASKVAYQRTDSRTNCKVMVRFNVSKDGEWRITKLIMDHNHEFVPLEQMHLLHSMRKVSEAKGGLIKSMVNAGMKVTNVWNYLGDEVGRYDKLGMTMKDMHNFVYT 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01659 185 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 11 172 IPR031052 GO:0006355
Tsu04g01659 185 Pfam FAR1 DNA-binding domain 32 124 IPR004330 -
Tsu04g01659 185 PANTHER OS12G0160900 PROTEIN 11 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01659 Tsu-Chr4 17539218 17539775 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu04g01659 FAR1 4.9e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01659 - - mtr:MTR_6g051425 328.561