Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01657 ATGAGTCTAAACTCTAGTGGTAGTGGCGGCAGTGGTGGTAGTGGGAGCGGCGGAAATAGTGGTAGCCCTTGTGGGGCATGCAAGTTTTTGAGGAGGAAGTGTGTGCCAGGGTGTATTTTTGCTCCGTACTTTGATTCGGAGCATGGTACGACCCACTTCGCGGCTGTGCACAAAGTTTTTGGGGCTAGCAATGTATCCAAACTCCTCCTTGGCATTCCAATTAATAGGAGGCTTGATGCTGCAGTCTCTCTTTGTTATGAAGCTCAAGCAAGGTTGAGAGATCCTATCTATGGATGTGTTGGTCACATCTTTGCTCTCCAGCAACAGGTGCTGAGTCTACAAGCTGAACTCTCCTACGTGCAAAGCCACATTAATTCATCAGAGTTAACCCAACCACCTCTACCACCACAACCACAGGCAGCCGTAGCACCAGCCGTCTTCTCCTTTGCCGATCTTCCACCACCCACTGCCACAACTATGCCGGTCACCTATGACATGTCTACACTTTTTGATCCTATGGGCCAACCTTCATTGGCTATGCAACAACAGAGGCCCAATATTGACCCACGTCAATATTTAGCTGCTCATGGCCCAACATCAACTAGTTCTCACAGACAAATTGGGTCTTCATCTGCACCATCCACCAATGCTTCATCATCTCCTTCTTCCTtttccaaattttcaaaatga 690 0.4739 MSLNSSGSGGSGGSGSGGNSGSPCGACKFLRRKCVPGCIFAPYFDSEHGTTHFAAVHKVFGASNVSKLLLGIPINRRLDAAVSLCYEAQARLRDPIYGCVGHIFALQQQVLSLQAELSYVQSHINSSELTQPPLPPQPQAAVAPAVFSFADLPPPTATTMPVTYDMSTLFDPMGQPSLAMQQQRPNIDPRQYLAAHGPTSTSSHRQIGSSSAPSTNASSSPSSFSKFSK 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01657 229 MobiDBLite consensus disorder prediction 173 229 - -
Tsu04g01657 229 PANTHER LOB DOMAIN-CONTAINING PROTEIN 18 5 204 - -
Tsu04g01657 229 PANTHER LOB DOMAIN CONTAINING PROTEIN 5 204 - -
Tsu04g01657 229 MobiDBLite consensus disorder prediction 195 229 - -
Tsu04g01657 229 MobiDBLite consensus disorder prediction 174 188 - -
Tsu04g01657 229 Pfam Lateral organ boundaries (LOB) domain 23 121 IPR004883 -
Tsu04g01657 229 ProSiteProfiles LOB domain profile. 22 124 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01657 Tsu-Chr4 17522601 17525958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01657 26 192 AS2 family AT2G45420 62.069 6.49e-66 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Tsu04g01657 LOB 2.2e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01657 K21994 - gmx:100777737 242.662