Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01633 ATGGCTGCTTGTGCTTTGTTCAATGGTAATGGTGGTGGTGGAAATAGTGATGAAGCTAATTTgagtaacaacaacaacaacaatagtaCTGCTTCTAACTCCAGCAACATAAGCAGTGAAGATTTACACCACAACATGTTACAAACACAACCTCATCATTCTGAAAGAAAATTACTCAGAAAAAGAATGGCTTCTGAAATGGAACTTCAACttcataacaacaacaacaacaacaactcttCTGATTATCATAGATTTCCTCGtcgcaacaacaacaacaacatatcCTCATTGAATTGTTCTTTACCTTCGACCACACAAAAAGgttccaccaccaccacaacaacaacaacaacaacattagtcGCAGGTACAAACAatagtactactactactaataataataatagtaataataactaTCATTATcataacaataatattaataacaatattagtcataataataataatagtaatattgcTTTGTCACGAGATAATGTTTCTATTCAAAATTACCCCACTGTATCCGTCACAACCAACTACTCCACTATGTTGCTACCttcttcttccaacaatctcaacAATTCCTCAAACTACACCCCCCATTTTCAACAACCACTTGTAGAAGAACAACAAAACCCTCTTCCTTCAATCTGTGGATTCTCTGGTTTACCACTTTTTCCATctcaaaaccaaaccaacaacAGAAACAATGGTAGTAGTAGTTGTAACATAACTTCTTCTGCAGCAGCTACTAatattgttgatgttgtttCACCTTCAATGATGGAAGAAACTTCAGCTACAACAAATTGGATTGATGGTATTCTAAAAGATCTTATTCATACTTCTAACAGTGTTTCCATTTCTCAACTCATTAACAATGTTAGAGAGATTATATATCCTTGTAATCCAAATCTTGCTCTTGTTCTTGAACATAGACTTCGTCTTCTCACTGAAACTACACCACAAAACTGTTCTGGTGTTACaacagagagaaaaagaaacaacacAGAACAACAACAAAGTGTTGTTAATGTTAATGTTTTAGCAGCTCCTAATGTTAATTCCTCAGTGAAACTTATGAATCGTGTTGATGACATTGTTCAAACAAGTTTACATTTTTCTGATACATCACATGTtctgaatcaaaatcaaaacatttttcCTAATTGGGTTGTGCCTCAAAATCAtatcaacaacaataacaataataacccTTCAGTTTCATTGGTTACTTTACCTTCACAACCAACACAACAAgatcaacaacatcaagaacATCATCAAGAAGATCTTGCACCTGTAAGAACAGCAGAAACTACTTCTGCTGAGTTGGCACTaacaagaaagaagaaagaggagATTAAAGAACAGAAGAAGAAAGATGAAGAAGGTTTACACCTTCTAACACTACTTCTCCAATGTGCAGAAGCTGTATCAGCAGAGAATCTAGAACAAGCAAATAAGATGTTACTCGAGATTTCGCAGCTTTCGACGCCTTTCGGCACATCAGCACAAAGAGTAGCAGCTTATTTCTCAGAAGCAATTTCAGCAAGACTAGTGAGTTCATGTTTAGGAATCTACACAACACTTCCACCACACATTACACCACATAATCAAAAAGTTGCTTCAGCTTTTCAAGTCTTCAATGGAATTAGCCCATTTGTGAAATTCTCTCATTTCACTGCTAATCAAGCTATACAAGAAGCATTTGAAAGAGAAGAAAGAGTTCACATCATAGATCTTGATATAATGCAAGGTTTACAATGGCCTGGTTTGTTTCATATTCTTGCTTCGAGACCCGGTGGACCGCCTTATGTGAGACTCACTGGATTAGGTACTTCCATGGAAACACTTGAAGCTACTGGTAAACGTTTGTCTGATTTTGCATCTAAACTTGGTCTTCCTTTTGAGTTCTTTCCTGTTGCTGAGAAAGTTGGAAACATTGATCCTGATAAGCTTAATGTTAGTAAATCAGAAGCTGTTGCTGTTCATTGGTTGCAACATTCTTTATATGATGTTACTGGATCAGATACAAACACTTTGTGGCTCTTGCAAAGGTTGGCACCTAAAGTGGTAACAGTAGTGGAACAAGACTTAAGCAATGCAGGTTCATTTTTAGGAAGGTTTGTGGAAGCAATACATTACTACTCAGCACTATTTGATTCTCTTGGTTCAAGCTATGGTGAAGAGAGTGAAGAGAGACATGTGGTTGAGCAACAACTATTATCAAGAGAGATTCGTAATGTACTTGCGGTCGGAGGACCATCAAGGAGTGGTGAAATAAAGTTTcataattggagagaaaaacTTCAACAGTGTGGTTTTAGAGGTATCTCTTTGGCTGGTAATGCTGCTACTCAAGCTAGTCTTCTTCTTGGCATGTTCCCTTCTGAAGGGTATACTTTAGTTGAGGATAATGGTATTCTTAAACTTGGTTGGAAAGATCTTTGTTTGCTTACTGCTTCTGCTTGGAGACCTTCTTTTCATACCAACAATGTCATTCCACATCATAACTAA 2526 0.3159 MAACALFNGNGGGGNSDEANLSNNNNNNSTASNSSNISSEDLHHNMLQTQPHHSERKLLRKRMASEMELQLHNNNNNNNSSDYHRFPRRNNNNNISSLNCSLPSTTQKGSTTTTTTTTTTLVAGTNNSTTTTNNNNSNNNYHYHNNNINNNISHNNNNSNIALSRDNVSIQNYPTVSVTTNYSTMLLPSSSNNLNNSSNYTPHFQQPLVEEQQNPLPSICGFSGLPLFPSQNQTNNRNNGSSSCNITSSAAATNIVDVVSPSMMEETSATTNWIDGILKDLIHTSNSVSISQLINNVREIIYPCNPNLALVLEHRLRLLTETTPQNCSGVTTERKRNNTEQQQSVVNVNVLAAPNVNSSVKLMNRVDDIVQTSLHFSDTSHVLNQNQNIFPNWVVPQNHINNNNNNNPSVSLVTLPSQPTQQDQQHQEHHQEDLAPVRTAETTSAELALTRKKKEEIKEQKKKDEEGLHLLTLLLQCAEAVSAENLEQANKMLLEISQLSTPFGTSAQRVAAYFSEAISARLVSSCLGIYTTLPPHITPHNQKVASAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMETLEATGKRLSDFASKLGLPFEFFPVAEKVGNIDPDKLNVSKSEAVAVHWLQHSLYDVTGSDTNTLWLLQRLAPKVVTVVEQDLSNAGSFLGRFVEAIHYYSALFDSLGSSYGEESEERHVVEQQLLSREIRNVLAVGGPSRSGEIKFHNWREKLQQCGFRGISLAGNAATQASLLLGMFPSEGYTLVEDNGILKLGWKDLCLLTASAWRPSFHTNNVIPHHN 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01633 841 MobiDBLite consensus disorder prediction 6 38 - -
Tsu04g01633 841 MobiDBLite consensus disorder prediction 72 137 - -
Tsu04g01633 841 MobiDBLite consensus disorder prediction 13 38 - -
Tsu04g01633 841 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 184 830 IPR005202 -
Tsu04g01633 841 MobiDBLite consensus disorder prediction 399 424 - -
Tsu04g01633 841 Coils Coil 440 460 - -
Tsu04g01633 841 Pfam GRAS domain family 471 828 IPR005202 -
Tsu04g01633 841 ProSiteProfiles GRAS family profile. 461 828 IPR005202 -
Tsu04g01633 841 MobiDBLite consensus disorder prediction 399 443 - -
Tsu04g01633 841 PANTHER PROTEIN SCARECROW 184 830 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01633 Tsu-Chr4 17289273 17293274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01633 435 829 GRAS Transcription Factor Family AT3G54220 83.627 0.0 671
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tsu04g01633 GRAS 6e-124 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01633 - - gmx:100806779 956.822
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00380 06 3250177 3252697 Tsu04g01633 04 17289273 17293274 PCT