Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01624 ATGGCTAAAGTAAAGAATGTATTGGATGATTGTGTTTACAAAATTGAAACTGCTTTAAAGAAGCAGAATATAAACTTAAAGCATACCACACAAGAGCATGAGGAGATCAATTCTGCAATTATAAGGGCCAAAGATTTGCTTGATGAGAATGACCTGAACGAAGTAGAAATTCTTGAGGATCATTTGAAGGAGCTTGAAAGTATGTTTAGAAACACTATAGCCAAGATTggctag 234 0.3291 MAKVKNVLDDCVYKIETALKKQNINLKHTTQEHEEINSAIIRAKDLLDENDLNEVEILEDHLKELESMFRNTIAKIG 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01624 77 Coils Coil 55 75 - -
Tsu04g01624 77 Gene3D - 1 77 IPR029048 -
Tsu04g01624 77 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 4 75 IPR029048 -
Tsu04g01624 77 PANTHER HEAT SHOCK 70 KDA PROTEIN 2 75 - -
Tsu04g01624 77 PANTHER HEAT SHOCK PROTEIN 70KDA 2 75 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01624 Tsu-Chr4 17172741 17172974 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01624 4 76 Calmodulin-binding Proteins AT3G12580 34.247 1.70e-06 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01624 - K19947 mtr:MTR_1g116250 73.9442