Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01593 ATGATGCCACAAACACAATCCTACTTTGTTACTATACAAATTTTCTTACTACTACTTGTGTTTCCTCAAACTAAATCTGATCTAAATTTAGAAAAGCAAGCATTACTTGATTTTATTGCTACATTACATCATGGTGAAAAAGTCAATTGGAGTTTCAATACTTCAATATGCACTTCTTGGGTAGGAGTTAAATGCAATCCTAAGGGCTCTCATGTTAATTCCGTGAGGCTTCCGGGCGTTGGATTGCGCGGTTTTCTCCCGGAAAACACCCTCGGTAAGCTACATGGTTTAATCAGTCTCAGTCTTAGGTCTAACAACTTGTTTGGAAACCTTCCAAGTGACATATTTTCAATTCATTCTCTAAGATTTATATATCTTCAACATAACAATTTTTCAGGTCATATTTCTGATTATTTACCACCCTATCTTATGTTTCTTGATTTGTCCTATAACTCTTTCACTGGAAAAATTCCAAGTATAGTCCAAAACTTAACATATCTAATAGGACTAAATCTTCAAAATAACTCTCTCATAGGACCTATTCCTAATGTTATTGTTGAGCTTCCTAACCTTAAGAATTTGGATTTGAGCTTCAATTATTTGAATGGTTCAATCCCCTCAGGGCTTCATAAGTTTCATGCATCATCATTTAAGGGAAACTTAGGATTATGTGGTGCACCTTTGAAACAATGTTCTTTAGGTTCTTCCCCTACTACTATTTTGTCTCCAATAATAGTCTCACAAAAAGTACCTAGTGAAAACTCAAACAAGAAGTTAAGTACATGGGGGAAAATTGCTATTTCTTTAGGAGTTTTTGCAGCAATGCTTATTCCAGGTTTTGTAGTAGTGTTCTACTGTTTGAAGAAAAAAGTAGGTGAACAAAATGTAGCAACTAAAGAGAAGAGTGAAAAGCTTATGGAAGAATTTGGAAGTGGTGTGcaagaaaatgagagaaataggctaatattttttgaaggttgttcttGTAATTTTGATCTTGATGATTTGTTAAGAGCTTCAGCTGAAGTACTTGGTAAGGGAAGTTGTGGAACAACTTATAAAGCTATTTTGGAAGAAGGGACAATAGTGGTTGTAAAGAGGTTAAAAGAAATAACAGTGGTGAAAAAAGAATTTGAACAGCAAATGGAGATTGTTCAAAGACTTGATCATCATCCAAATGTAGTTCCACCTCTTGCTTACTATTATTCAAAGGATGAAAAATTGATTGTTTATGATTACTTCACATCTGGCAGCTTTTCCAAGTTATTGCATGGAACAGGTGAAACTGCACGAACTCGACTAGATTGGGATTCAAGATTGAAGATCATGGCTGGAGCTGCAAAGGGCATTGCCTATATCCACTCAGCAAATGGAAGGAAACTTGTCCATGGCAATATAAAATCATCCAATGTGCTTCTCTCCATGGATCTTCAAGGCTGCATTTCAGATTTTGGCCTAACACCACTAACAAGTTTATGTGTCTCCCCTAAAAGTCCTCCAGGATACCGAGCACCGGAGGTGAACGAAAGCAgaaaatctacccaaaaatctGATGTATACAGCTTTGGTGTTCTTCTTCTTGAGATGCTGACAGGGAAAACACCAGTTCAATATTCAGGTCATGAAGATGTGTTTGATCTTCCAAAATGGGTTCAATCTGTTGTTAGAGAGGAATGGACTGCTGAAGTGTTTGATGTTGAGCTAATGAGATATTCAAACATCGAAGAAGAGCTTGTGCAGATGCTGCAACTGGCAATGGCATGTGTAGCAGTGATGCCTGACACAAGACCTTCAATGGAAGAAGTTGTTAGGATGATTGAAGACATCAGAGGATCCATTTATTAG 1845 0.3577 MMPQTQSYFVTIQIFLLLLVFPQTKSDLNLEKQALLDFIATLHHGEKVNWSFNTSICTSWVGVKCNPKGSHVNSVRLPGVGLRGFLPENTLGKLHGLISLSLRSNNLFGNLPSDIFSIHSLRFIYLQHNNFSGHISDYLPPYLMFLDLSYNSFTGKIPSIVQNLTYLIGLNLQNNSLIGPIPNVIVELPNLKNLDLSFNYLNGSIPSGLHKFHASSFKGNLGLCGAPLKQCSLGSSPTTILSPIIVSQKVPSENSNKKLSTWGKIAISLGVFAAMLIPGFVVVFYCLKKKVGEQNVATKEKSEKLMEEFGSGVQENERNRLIFFEGCSCNFDLDDLLRASAEVLGKGSCGTTYKAILEEGTIVVVKRLKEITVVKKEFEQQMEIVQRLDHHPNVVPPLAYYYSKDEKLIVYDYFTSGSFSKLLHGTGETARTRLDWDSRLKIMAGAAKGIAYIHSANGRKLVHGNIKSSNVLLSMDLQGCISDFGLTPLTSLCVSPKSPPGYRAPEVNESRKSTQKSDVYSFGVLLLEMLTGKTPVQYSGHEDVFDLPKWVQSVVREEWTAEVFDVELMRYSNIEEELVQMLQLAMACVAVMPDTRPSMEEVVRMIEDIRGSIY 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01593 614 ProSiteProfiles Protein kinase domain profile. 338 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g01593 614 Pfam Protein kinase domain 341 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g01593 614 Gene3D Ribonuclease Inhibitor 142 233 IPR032675 -
Tsu04g01593 614 SUPERFAMILY L domain-like 48 212 - -
Tsu04g01593 614 SUPERFAMILY Protein kinase-like (PK-like) 342 606 IPR011009 -
Tsu04g01593 614 Gene3D Phosphorylase Kinase; domain 1 304 413 - -
Tsu04g01593 614 PANTHER OS05G0480400 PROTEIN 12 611 - -
Tsu04g01593 614 Pfam Leucine rich repeat N-terminal domain 29 66 IPR013210 -
Tsu04g01593 614 Pfam Leucine rich repeat 142 201 IPR001611 GO:0005515
Tsu04g01593 614 Gene3D Transferase(Phosphotransferase) domain 1 415 613 - -
Tsu04g01593 614 PANTHER OS05G0588300 PROTEIN 12 611 - -
Tsu04g01593 614 Gene3D Ribonuclease Inhibitor 30 141 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01593 Tsu-Chr4 16777278 16779752 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01593 26 612 Receptor kinase-like Gene Family AT5G58300 58.516 0.0 679
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tsu04g01593 Pkinase 4.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01593 - - gmx:100810832 937.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g01593 04 16777278 16779752 Tsu04g01593 04 16777278 16779752 ECH