Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01589 ATGATGAGGAACAAGGATAGATACTTTGTTTGTGTTCCAATGTTTGTGTGCTTGGTGTTAGCTATTGAACTTGTTCTAGGACAAGATTTTAAGCCTACAGATAAAATCCTGTTGAATTGTGGTGGCCCTGCTGTTAGTACTGATCCTGATGGCCGTGAATGGACTACTGATAATGGTTCCAAGTTTGGTTCGAAAACTGGTAAATCAACCACATCACAAGCTGCAACTCAAGATCCTGCAGTGCCTCAGGTTCCATTTATGACGGCGAGGATTTTCCAATCGCCGTATACCTATAGTTTTCCGGTGGCTTCGGGTTGGAAGTTCCTCCGGTTGTACTTTTATTCGGCTTCTTATTCCGGGCTTAATATATCTGATGCACGGTTTGGTGTGACAGCACAATCCTACACCGTGCTTAGGAATTTCAGTGTTTTAGAGACCAGTTTGGGTTTGAATTATGAGTACATTGTGAAGGAATACTCTATCCATGTTGATGAGGGAACCTTGAATGTGACTTTTACTCCATCTACCAGTGCATCTAAAGCCTATGCATTTGTTAATGGGATTGAGGTTGTGTCCATGCCTGATATTTATACTTCTACCGATGCATCCCCTTTGACGGTTGGTACAAATACTGTCTTCACCATTGACAACACCACTGCACTTGAGAATGTTTATAGGGTAAATGTGGGTGGGAATGATATATCGCCGTCCCATGATACTGGCATGTTTAGGTCATGGACCGATGATGTGCGTTACATCTTTGGGGCCGCATTTGGAGTTACCGAGACTGCTGATCCAGAAGTGAAGTTTGAGTATCCTCCAGGAACACCATCTTATATTGCTCCGAAAGATGTCTACTTGACAGCCAGATCAATGGGTCCGAATGCCAATATCAGCTTGAATTTCAACTTGACTTGGATTTTCTCAGTTGATTCTGGGTTTTCCTATCTTGTGAGACTTCATTTTTGTGAGGGCACGACGACTATATCCAAGATTAATCAAAGAGTATTTGATATATACCTCGGTAATCAAACCGCTCAGGATGGAGCTGATGTTATTGCCTGGGCAGAAAATTTTAACCTTCCACATTCAAATGGTGTTCCAGTGCATCAAGATTATGTTGTATATGCTCCCAGTGGTTCACCGCAACAGGACCTGTGGCTTGCACTGCATCCAGATACAGCTTCTAAGTCTAATTACTACGACGCAATCTTGAATGGAGTAGAGATATTCAAAATCAGTGATAGTAAAGGTAATCTGGCAGGGACAAACCCTCCTCCTCTGCTGGTGCAAGACTTAATTGACGTATCGTTGGCTAGGAAATCTAGTCACGGTAAATCTAAGAGTCATACAGGAATTATTGCTGGAGGTGTTGGCGGAGGAGTTGTTTTACTACTTTTGATTGGACTATTTGCTTTTGGCACATCTCGTCGCCGTAGGAATGGAAAAGATTCTAGTACAAGTGAAGGTCCGTCTGGCTGGCTTCCACTTTCTCTTTATGGTAATTCACACTCTGCAGCTTCTGGCAAGACCAATACGACTGGAAGTTACACATCCACTCTTCCATCAAACCTTTGTCGTCATTTCTCATTTGCTGAAATCAAGGCTGCCACAAACAACTTTGACGAGGCTTTGATTCTCGGTGTGGGAGGATTTGGCAAGGTTTACAAAGGAGAAATTGACGGTGGATCAACCAAAGTTGCAATTAAACGTGGGAATCCACTCTCCGAGCAGGGTGTGCACGAATTCCAAACTGAAATTGAGATGCTCTCCAAACTTCGTCACCGTCACCTTGTTTCACTGATTGGATACTGTGAAGAGAACACTGAAATGATCCTTGTCTATGACCATATGGCCTACGGAACACTCAGAGAACATCTATACAAGACTCAGAAACCTCCGCTTCCATGGAAGCAAAGGCTCGAAATATGCATTGGAGCTGCTCGTGGTTTACACTATCTTCACACCGGCGCTAAGCATACTATCATCCACCGAGACGTGAAGACAACAAACATTTTACTAGATGAGAAATGGGTGGCCAAGGTTTCTGATTTCGGACTGTCTAAAACAGGTCCTACATTGGATAATACTCACGTAAGTACTGTGGTAAAGGGTAGTTTTGGTTACTTGGATCCAGAATACTTCAGGAGGCAGCAACTGACCGACAAATCCGATGTGTACTCATTTGGTGTGGTTCTATTCGAGATACTGTGTGCTCGCCCGGCTTTGAACCCAACACTTGCTAAGGAGCAGGTAAGTCTAGCTGAATGGGCAGCTCATTGTTACAAAAAAGGCATTCTTGACCAAATCACAGATCCTTATCTGAAAGGCAAGATAGCTCCAGAGTGTTTTAAGAAGTTTGCCGAGACTGCAATGAAGTGTGTGAACGACCAAGGCATTGAAAGGCCATCCATGGGTGATGTCTTGTGGAACCTGGAATTTGCTTTGCAGCTGCAAGAAAGCGCAGAGGAGAGTGGCAACGGTTTTGGCGGAATATGTGGTGAAGAGGAGCCGTTGTTTGTAGATTCAAAAGGAAAGAAGGAGTTGGATGCCGGATATGACGGTAATGTGACAGACTCTAAAAGCAGTGGCATGTCTATGAGCATTGGAGGTAGAAGCTTGGCTAGTGAAGACTCTGATGGGTTAACTCCTAGTGCTGTGTTTTCACAGATCATGAATCCAAAAGGACGTTAA 2694 0.4376 MMRNKDRYFVCVPMFVCLVLAIELVLGQDFKPTDKILLNCGGPAVSTDPDGREWTTDNGSKFGSKTGKSTTSQAATQDPAVPQVPFMTARIFQSPYTYSFPVASGWKFLRLYFYSASYSGLNISDARFGVTAQSYTVLRNFSVLETSLGLNYEYIVKEYSIHVDEGTLNVTFTPSTSASKAYAFVNGIEVVSMPDIYTSTDASPLTVGTNTVFTIDNTTALENVYRVNVGGNDISPSHDTGMFRSWTDDVRYIFGAAFGVTETADPEVKFEYPPGTPSYIAPKDVYLTARSMGPNANISLNFNLTWIFSVDSGFSYLVRLHFCEGTTTISKINQRVFDIYLGNQTAQDGADVIAWAENFNLPHSNGVPVHQDYVVYAPSGSPQQDLWLALHPDTASKSNYYDAILNGVEIFKISDSKGNLAGTNPPPLLVQDLIDVSLARKSSHGKSKSHTGIIAGGVGGGVVLLLLIGLFAFGTSRRRRNGKDSSTSEGPSGWLPLSLYGNSHSAASGKTNTTGSYTSTLPSNLCRHFSFAEIKAATNNFDEALILGVGGFGKVYKGEIDGGSTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENTEMILVYDHMAYGTLREHLYKTQKPPLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDNTHVSTVVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEILCARPALNPTLAKEQVSLAEWAAHCYKKGILDQITDPYLKGKIAPECFKKFAETAMKCVNDQGIERPSMGDVLWNLEFALQLQESAEESGNGFGGICGEEEPLFVDSKGKKELDAGYDGNVTDSKSSGMSMSIGGRSLASEDSDGLTPSAVFSQIMNPKGR 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01589 897 MobiDBLite consensus disorder prediction 48 77 - -
Tsu04g01589 897 PANTHER - 21 848 - -
Tsu04g01589 897 Gene3D Phosphorylase Kinase; domain 1 526 617 - -
Tsu04g01589 897 Pfam Protein tyrosine and serine/threonine kinase 547 809 IPR001245 GO:0004672|GO:0006468
Tsu04g01589 897 SUPERFAMILY Protein kinase-like (PK-like) 514 814 IPR011009 -
Tsu04g01589 897 SMART serkin_6 541 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g01589 897 ProSitePatterns Serine/Threonine protein kinases active-site signature. 662 674 IPR008271 GO:0004672|GO:0006468
Tsu04g01589 897 CDD STKc_IRAK 547 813 - -
Tsu04g01589 897 Gene3D Transferase(Phosphotransferase) domain 1 618 828 - -
Tsu04g01589 897 PANTHER OS07G0166700 PROTEIN 21 848 IPR045272 GO:0004714|GO:0006468
Tsu04g01589 897 ProSitePatterns Protein kinases ATP-binding region signature. 547 570 IPR017441 GO:0005524
Tsu04g01589 897 Gene3D - 220 414 - -
Tsu04g01589 897 Gene3D - 36 194 - -
Tsu04g01589 897 ProSiteProfiles Protein kinase domain profile. 541 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g01589 897 MobiDBLite consensus disorder prediction 51 77 - -
Tsu04g01589 897 MobiDBLite consensus disorder prediction 856 890 - -
Tsu04g01589 897 MobiDBLite consensus disorder prediction 851 897 - -
Tsu04g01589 897 Pfam Malectin-like domain 38 413 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01589 Tsu-Chr4 16733822 16737673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01589 19 897 Receptor kinase-like Gene Family AT3G51550 71.946 0.0 1276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Tsu04g01589 Malectin_like 6.2e-36 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01589 - - gmx:100499644 1513.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g01589 04 16733822 16737673 Tsu04g01589 04 16733822 16737673 ECH