Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01569 atggaaaatattgAAAATCTAGCTCATGGTCGTGGAAAGGTAATTGGTGAATTGTTAAGAGGTCGTGAATTAGCAAATCAACTTAGACATATTCTCAATGAAAGTGGTGATATTgatcataataataatactgaTTCAACAACACCATATGCTGAAAATCTTTTGAAAGAAGTGCTTATGACTTTTACAAATTCACTCTTGTTCTTGAACAATAACAATCTTACTTCAGATGTCTCTGATGCTCAACTCGCCAAATCTGAGGATTCTTTGGAGAGTAATTGCAAGAGTACTTCAATTGTTAAGGAAAGAAGAGGTTGTTACAAAAGAAGAAAAGTTTCACAAACATGGGAGAACGAATCTGAAAAACCAGTGGATGATGGTCATCAATGGAGAAAGTATGGCCAAAAAAAGATCCTCCACATTGATTTCCCAAGGAACTACTATAGGTGCACTCACAAATATGATCAAGGTTGCAAAGCAACAAAACAAGTGCAACAAATTCAAGAAGATCCACTTCTTCACAAAACAACATACTATGGTCATCACACTTGTAGTGCCATACAAAACCCTGagatcatagtggattcactttCTCCTACTCATCACTCTTCCATGTTCCTTAGCTTTGATAACTCTTTCCCAACACCAACCAAACAAGATTGCCCTTTTCTCTCAACTTCTTCTCATCCATCATCAACTTCATCATCAGTGAAAAGAGAGGAGTGCAAGGAAGAGATTGTTaatcctcctcctcctcctcccccTCCTTCATCTTCCCACAATGATTACCTTTCTGGACTCACTTTTGATGATTCAGAAAAACATGTCACACTATCATCAACACTTGATTCTCATGATCACCTAGGTGTCAATATTTCTGATATCTCGTATGATGATGTCCTCAATTGGCCTCTTTCTTGA 921 0.342 MENIENLAHGRGKVIGELLRGRELANQLRHILNESGDIDHNNNTDSTTPYAENLLKEVLMTFTNSLLFLNNNNLTSDVSDAQLAKSEDSLESNCKSTSIVKERRGCYKRRKVSQTWENESEKPVDDGHQWRKYGQKKILHIDFPRNYYRCTHKYDQGCKATKQVQQIQEDPLLHKTTYYGHHTCSAIQNPEIIVDSLSPTHHSSMFLSFDNSFPTPTKQDCPFLSTSSHPSSTSSSVKREECKEEIVNPPPPPPPPSSSHNDYLSGLTFDDSEKHVTLSSTLDSHDHLGVNISDISYDDVLNWPLS 306
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01569 306 ProSiteProfiles WRKY domain profile. 119 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu04g01569 306 SMART WRKY_cls 124 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu04g01569 306 MobiDBLite consensus disorder prediction 220 266 - -
Tsu04g01569 306 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 12 300 - -
Tsu04g01569 306 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 12 300 IPR044810 GO:0003700
Tsu04g01569 306 MobiDBLite consensus disorder prediction 220 235 - -
Tsu04g01569 306 Pfam WRKY DNA -binding domain 125 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu04g01569 306 SUPERFAMILY WRKY DNA-binding domain 122 185 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu04g01569 306 Gene3D WRKY domain 110 186 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Tsu04g01569 Tsu-Chr4 16515804 16518653 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01569 13 207 WRKY Transcription Factor Family AT3G56400 37.321 2.74e-37 132
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tsu04g01569 WRKY 3e-23 CL0274
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01569 - - mtr:MTR_7g073430 440.654
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g01569 04 16515804 16518653 Tsu04g01569 04 16515804 16518653 ECH