Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01536 ATGAGTTTCAGAGACAGGAACATTGAAGTGGAAGAGAGGGAATGTGAAAAATCAGTGTTGGGGACAAATGGGTCATTAACAAGTACTACACAGTTTACAATTGATGACAATCTTTTGGTTGACCCAAAATTGCTCTTTATTGGTTCCAAAATTGGTGAAGGAGCTCATGGAAAAGTTTATCAAGGAAGATATGTAGATCAAATTGTTGCAATCAAAGTTCTGCAGCGTGGGAGCACCTCAGAAGAAAGAGCTTCGCTTGAAAATCGTTTTGCAAGGGAAGTTAATATGATGTCTCGTGTCCACCATGACAATCTTGTAAAGTTTATCGGAGCATGTAAGGATCCTCTAATGGTGATAGTTACAGAGCTATTACCAGGGATGTCACTGCGAAAATATTTAACAAGTATCCGTCCTAAACCATTAGACCTTCATGTGGCTATAAATTTTGCCCTTGATATCGCTCGAGCCTTGGATTGGCTTCATGCTAACGGGATCATTCATAGAGATTTAAAACCTGACAATCTGTTGCTTACAGCAAATCAGAAGTCTGTAAAACTTGCAGATTTTGGTCTTGCAAGAGAAGAATCGGTGACCGAAATGATGACTGCAGAAACAGGAACTTACCGATGGATGGCACCAGAGTTGTACAGTACTGTAACGTTGCGTCAAGGAGAGAAAAAGCACTATAACAACAAGGTTGATGTGTATAGCTTTGGAATTGTTTTGTGGGAGCTACTAACAAATCGCATGCCTTTTGAAGGAATGTCCAATTTACAGGCTGCTTATGCTGCTGCCTTCAAGCAAGAGAGGCCAAAAATTCCAGATGATATATCACCTGATCTTGCTTTTATCATACAATCATGCTGGGTTGAAGATCCGAACATGAGACCGAGCTTTAGTCAGATAATCCGGATGCTCAACGCGTTTCTCTTCACACTCTCACCACTATCTCCTCCCTTGCCAGAACCTGAAAATGAACCTGAGGCGGCAACAACGAGTAATGGTACCATTACTGAGTTTTCTGCCCGGAACAAAGGAAAGTTTGCTTTTCTTCGCCAGTTGTTTACTTCGAAAAGGATAAAAAACTAA 1089 0.4096 MSFRDRNIEVEERECEKSVLGTNGSLTSTTQFTIDDNLLVDPKLLFIGSKIGEGAHGKVYQGRYVDQIVAIKVLQRGSTSEERASLENRFAREVNMMSRVHHDNLVKFIGACKDPLMVIVTELLPGMSLRKYLTSIRPKPLDLHVAINFALDIARALDWLHANGIIHRDLKPDNLLLTANQKSVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPKIPDDISPDLAFIIQSCWVEDPNMRPSFSQIIRMLNAFLFTLSPLSPPLPEPENEPEAATTSNGTITEFSARNKGKFAFLRQLFTSKRIKN 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01536 362 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 7 337 - -
Tsu04g01536 362 CDD STKc_MAP3K-like 51 306 - -
Tsu04g01536 362 PRINTS Tyrosine kinase catalytic domain signature 121 134 IPR001245 GO:0004672|GO:0006468
Tsu04g01536 362 PRINTS Tyrosine kinase catalytic domain signature 159 177 IPR001245 GO:0004672|GO:0006468
Tsu04g01536 362 PRINTS Tyrosine kinase catalytic domain signature 233 255 IPR001245 GO:0004672|GO:0006468
Tsu04g01536 362 PRINTS Tyrosine kinase catalytic domain signature 277 299 IPR001245 GO:0004672|GO:0006468
Tsu04g01536 362 ProSitePatterns Protein kinases ATP-binding region signature. 51 72 IPR017441 GO:0005524
Tsu04g01536 362 ProSiteProfiles Protein kinase domain profile. 45 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g01536 362 PANTHER SERINE-THREONINE PROTEIN KINASE 7 337 - -
Tsu04g01536 362 SUPERFAMILY Protein kinase-like (PK-like) 42 329 IPR011009 -
Tsu04g01536 362 Gene3D Phosphorylase Kinase; domain 1 33 124 - -
Tsu04g01536 362 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Tsu04g01536 362 SMART serkin_6 45 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g01536 362 Gene3D Transferase(Phosphotransferase) domain 1 127 319 - -
Tsu04g01536 362 Pfam Protein tyrosine and serine/threonine kinase 47 306 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01536 Tsu-Chr4 16162632 16165593 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01536 33 359 MAP Kinase Kinase Kinase AT5G01850 76.068 0.0 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Tsu04g01536 PK_Tyr_Ser-Thr 3.7e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01536 - - qsu:111990547 570.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g01536 04 16162632 16165593 Tsu04g01536 04 16162632 16165593 ECH