Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01527 ATGGGAAATTACAGGTTCAAATTTTCAGATATGATGCCTAATGCTTGGTTTTACAAGCTTAGAGACATGGGAAGAACAAGAAATCAAACACcaacaacacaacaacaaaggaagaaaaagaaatcttCAACCTCAAacacatcaaaatcaaagcaaCCCTACCAAACCAATCCAAGAAAATCTTACTACTTTACAAGAGAACTTAACCAAACAAGTAATAATAGAATCTACAACACTTCACCaccaacaacaaataacacaaatttTTCACCTGAACCACCTAGAAAatcatcattaaaaaaacaaagaccAAAAAGAAGAACACAAAAAACATCATTAACATCTTCATCTCCATTTGATAGTTCTGCAGAATCAGAATCCCCTGACCCAGAAATCAGAACAGACCGTGTTCTTCTTCCAACAAATGACATCATAATAGATGTTGACAACAATTCTATCATTGCAACAAGAAAAGATGATAAGCTAAATGGGTATGATTCATTATCAGAACTCATGAAACTTCCACCAATTGTGACAAAACCAGAGAATTTCAATTACTTACTCAACTATGCaaacaagaaacaaacaaaacccagaaacaaaatttcatcaaaTGATGAACATAATGTTAAAGGGTCACTAAAAGTCAAGATTTTGAAGGAAGAACAGAGGAACCTCAACACAAATACACCAAGTAGGAGATTCTCAATGAGTTCACCAAGTGTGAAACTTAGAATCAATTCACCAAGGATTTCAAGCAAGAAAATTCAATCACATGGCCGGAAAAGCGTGTCGTTGAACACCACCAGTTCGGCTAGCAACCGGAGAAGCCTTTCCGATAGTTTCGCAATTGTTAAGTCATCAATGAATCCACAGAGAGATTTCAGAGAATCAATGGTGGAGATGATTGTTCAGTACAATATTAGAACATCAAAGGATTTGGAAGATCTTCTTGCTTGTTACCTTTCTTTGAATTCAGATGAGTATCATGAAGTTATCATCAAAGTGTTCAAAcaaatttggtttgatttgactGATAATCAGTAG 1047 0.3037 MGNYRFKFSDMMPNAWFYKLRDMGRTRNQTPTTQQQRKKKKSSTSNTSKSKQPYQTNPRKSYYFTRELNQTSNNRIYNTSPPTTNNTNFSPEPPRKSSLKKQRPKRRTQKTSLTSSSPFDSSAESESPDPEIRTDRVLLPTNDIIIDVDNNSIIATRKDDKLNGYDSLSELMKLPPIVTKPENFNYLLNYANKKQTKPRNKISSNDEHNVKGSLKVKILKEEQRNLNTNTPSRRFSMSSPSVKLRINSPRISSKKIQSHGRKSVSLNTTSSASNRRSLSDSFAIVKSSMNPQRDFRESMVEMIVQYNIRTSKDLEDLLACYLSLNSDEYHEVIIKVFKQIWFDLTDNQ 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01527 348 ProSiteProfiles OVATE domain profile. 284 343 IPR006458 -
Tsu04g01527 348 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 3 348 - -
Tsu04g01527 348 Pfam DNA-binding domain 1 43 IPR025830 GO:0003677
Tsu04g01527 348 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 283 345 IPR006458 -
Tsu04g01527 348 Pfam Transcriptional repressor, ovate 288 344 IPR006458 -
Tsu04g01527 348 MobiDBLite consensus disorder prediction 25 136 - -
Tsu04g01527 348 MobiDBLite consensus disorder prediction 249 273 - -
Tsu04g01527 348 MobiDBLite consensus disorder prediction 25 95 - -
Tsu04g01527 348 MobiDBLite consensus disorder prediction 109 124 - -
Tsu04g01527 348 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 348 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01527 Tsu-Chr4 16082034 16083208 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Tsu04g01527 Ovate 8.6e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01527 - - mtr:MTR_7g072875 403.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g01527 04 16082034 16083208 Tsu04g01527 04 16082034 16083208 ECH