Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01526 ATGGCAGAAGAAGCgcaaattcaaacacaaaacGAGTCAAAACGCATCGTTTTGTTCGGTAAATATGAAATTGGAAGATTATTGGGCGTTGGTGCATCCGCGAAGGTGTATCACGCGACGAACGTTGAAAACGGAAAGAGCGTGGCGGTGAAAGTCATAAGCAAGAAAAAACTCATCAATGGAGAATTCGCCGCCAACATTGAACGCGAGATCTCAATTCTCCGCCGTCTCCACCACCCTAACATCATCGACCTGTTCGAAGTCCTAGCATCGAAGTCCAAAATTTACTTCATCGTTGAATTCGCTGCCGCCGGCGAACTCTTCGAAGAAGTAGCCGGCAAAGAAAAGCTTACCGAAGACCACGCTAGAAGATACTTCCGGCAGCTGATCTCCGCCGTGAAATACTGTCATTCTCGCGGTGTTTTCCACCGCGATCTTAAACTCGATAATCTGTTACTCGACGAGAATGATAATCTCAAAGTAACGGATTTCGGTTTAAGCGCCGTTAATAACCAGATCCGACCCGACGGTTTACTTCACACCGTCTGTGGAACACCGTCCTACGTCGCACCGGAGATTCTCGCGAAGAAAGGCTACGACGGTGCAAAAGCTGATGTATGGTCATGCGGCGTCGTTTTGTTTGCTCTTACTACAGGATATTTACCGTTCAATGATTATAATATTACCGTGCTTTATAGAAAAATTTACCGCGGTCAATTTCGTTTACCGAAATGGATATCTTGTGATCTGAAGAATCTCTTATCACGTTTGTTGGATACGAATCCTAAGACAAGGATAACcgttgatgagattcttgaagacCCGTGGTTTAATTCGGGTGGATTTAAGTTGGACCGGGTTTTAGTTAAGTCTGAGCTGGAGGAGGAGAATCGAACCGGATTCAAACCAATGAACGCTTTTGATTTGATATCTTTTTCAACTGGGTTGGATATGTCGGGTATGTTCGAGGAAAATGACGGGTCGGGTTTAATTGAACGGGTTGTTTCGTCGGAGGTGCCGGCGAAGATTTTAGAGAGGGTGGATGAGATGGTGAAGGGGACAAAAGTGGTGGTGAAAAGGTTTGAGAATTGTGGTGGAGCAAAGTTGGAAGGGCAAGAAGGTAATTTGATTGCTATTGTTTTGGTTTACCGGTTAACGGATGAGTTGGTTGTAGTTGAAATGAAGAAGCGTGGAAAAGGGGAGGAATATGGCGCGCAattgtggaaaaataaattgaaaccaTTGCTTGTTGAGTTGGCTCAGAAACAAGAAGTGACGGTTTCTCGGtga 1290 0.431 MAEEAQIQTQNESKRIVLFGKYEIGRLLGVGASAKVYHATNVENGKSVAVKVISKKKLINGEFAANIEREISILRRLHHPNIIDLFEVLASKSKIYFIVEFAAAGELFEEVAGKEKLTEDHARRYFRQLISAVKYCHSRGVFHRDLKLDNLLLDENDNLKVTDFGLSAVNNQIRPDGLLHTVCGTPSYVAPEILAKKGYDGAKADVWSCGVVLFALTTGYLPFNDYNITVLYRKIYRGQFRLPKWISCDLKNLLSRLLDTNPKTRITVDEILEDPWFNSGGFKLDRVLVKSELEEENRTGFKPMNAFDLISFSTGLDMSGMFEENDGSGLIERVVSSEVPAKILERVDEMVKGTKVVVKRFENCGGAKLEGQEGNLIAIVLVYRLTDELVVVEMKKRGKGEEYGAQLWKNKLKPLLVELAQKQEVTVSR 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01526 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Tsu04g01526 429 ProSiteProfiles Protein kinase domain profile. 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g01526 429 PANTHER - 7 427 - -
Tsu04g01526 429 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 14 7 427 - -
Tsu04g01526 429 SUPERFAMILY Protein kinase-like (PK-like) 18 301 IPR011009 -
Tsu04g01526 429 Gene3D Transferase(Phosphotransferase) domain 1 103 280 - -
Tsu04g01526 429 CDD CIPK_C 305 416 - -
Tsu04g01526 429 Gene3D Phosphorylase Kinase; domain 1 10 101 - -
Tsu04g01526 429 Pfam NAF domain 303 359 IPR004041 GO:0007165
Tsu04g01526 429 Gene3D Kinase associated domain 1, KA1 300 421 - -
Tsu04g01526 429 SMART serkin_6 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g01526 429 ProSiteProfiles NAF domain profile. 299 323 IPR018451 GO:0007165
Tsu04g01526 429 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Tsu04g01526 429 Pfam Protein kinase domain 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01526 Tsu-Chr4 15995369 15997143 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01526 4 426 CBL-interacting serine-threonine protein kinases AT2G30360 52.914 6.32e-161 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Tsu04g01526 Pkinase 1.7e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01526 - K12761 gmx:100788245 591.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g01526 04 15995369 15997143 Tsu04g01526 04 15995369 15997143 ECH