Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01515 ATGGctaaaattatttcaatttccaaagtttgtttgattttatgcTTTGTTGGGATAGTTTCAGCCCAATTATCCTCTGATTTTTACTCAACAACATGTCCTGATGCACTTTCAACCATTAAGTCAGTAGTAGATTCTGCTGTAGAAACTGAGGCTCGTATGGGAGCATCACTCCTTCGTCTTCAATTCCATGATTGCTTTGGATGTGATGCATCAGTATTGTTAGACGATACATCAAGTTTCACAGGTGAAAAAACAGCGGGCCCAAACGCTAATTCCTTAAGGGGTTTTGATGTAATTGACACCATCAAATCTCAACTTGAAACTTTATGTCCCAATGTTGTCTCGTGTGCAGATATTATCGCTGTAGCTGCTAGAGACTCTGTTGTCAAAcTAGATGGACCTAGTTGGGCAGTGCAATTGGGCAGAAGGGATTCAATCACAGCAAGTTTAGATTCTGCAAACACAGATTTACCTGGTCCTGATACGGATCTAAGTGGTCTTATTGCTGCTTTTGATAACAAAGGATTCACAGCCAAAGAAATGGTTGCTCTATCAGgagCTCACACAATTGGTCAAGCAAGGTGTTTATTCTTCAGAAACAGGATTAACAATGAAGACAACATAGATCCAACTTTTGCAACATCATTGCAAGCAAATTGTCCTACCACAGGTGGTGATGACAATTTGTCACCACTTGACACAACCACTCCAAACACATTTGACAATGCTTATTACCAGAACTTGCAAAATCAAAAGGGTCTCTTTCATTCTGATCAAGAGCTTTTCAATGGAGGATCTACAGATTCTGATGTTGATCAATATAGTAGTGACCCTTCAAGTTTTGCTACTGATTTTGGTAATGCTATGATCAAAATGGGAAATCTTAATCCACTTACTGGGAACAATGGTCAGATTAGGGTTAATTGCAGGGCTATCAATTGA 945 0.3778 MAKIISISKVCLILCFVGIVSAQLSSDFYSTTCPDALSTIKSVVDSAVETEARMGASLLRLQFHDCFGCDASVLLDDTSSFTGEKTAGPNANSLRGFDVIDTIKSQLETLCPNVVSCADIIAVAARDSVVKLDGPSWAVQLGRRDSITASLDSANTDLPGPDTDLSGLIAAFDNKGFTAKEMVALSGAHTIGQARCLFFRNRINNEDNIDPTFATSLQANCPTTGGDDNLSPLDTTTPNTFDNAYYQNLQNQKGLFHSDQELFNGGSTDSDVDQYSSDPSSFATDFGNAMIKMGNLNPLTGNNGQIRVNCRAIN 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01515 314 PANTHER PEROXIDASE 72-RELATED 15 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g01515 314 ProSiteProfiles Plant heme peroxidase family profile. 23 314 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g01515 314 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g01515 314 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g01515 314 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g01515 314 PRINTS Haem peroxidase superfamily signature 234 249 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g01515 314 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g01515 314 Gene3D Peroxidase, domain 2 159 293 - -
Tsu04g01515 314 CDD secretory_peroxidase 23 313 IPR033905 GO:0004601|GO:0042744
Tsu04g01515 314 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Tsu04g01515 314 MobiDBLite consensus disorder prediction 260 279 - -
Tsu04g01515 314 PANTHER PEROXIDASE 15 314 - -
Tsu04g01515 314 Pfam Peroxidase 41 278 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g01515 314 PRINTS Plant peroxidase signature 232 247 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g01515 314 PRINTS Plant peroxidase signature 248 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g01515 314 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g01515 314 PRINTS Plant peroxidase signature 288 301 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g01515 314 PRINTS Plant peroxidase signature 180 192 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g01515 314 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g01515 314 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g01515 314 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g01515 314 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g01515 314 SUPERFAMILY Heme-dependent peroxidases 23 314 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tsu04g01515 314 Gene3D - 27 311 - -
Tsu04g01515 314 ProSitePatterns Peroxidases proximal heme-ligand signature. 181 191 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01515 Tsu-Chr4 15826782 15830080 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01515 19 314 Peroxidase AT5G05340 61.333 1.21e-132 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01515 K00430 - gmx:100815142 468.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g01515 04 15826782 15830080 Tsu04g01515 04 15826782 15830080 ECH