Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01514 ATGATGCTTCCAATCaccaaagttctatttttcttaCTCTTTTGCTTTATTGGCACAATTTCAGCTCAATTATCCTctaatttttatatcaaaacatGTCCTCTTGTGCTTCCAACCATTAAAACTGAAATAGTTGCTGCTGTGGCCAATGAGGCTCGCATGGGAGCCTCTCTACTCCGTCTTCATTTCCATGATTGTTTTGTTCAAggaTGCGATGCATCAGTACTGTTGGACGATACATCAAGTTTCACAGGTGAAAAATCAGCAGGTCCAAATGCTAATTCGCTCAGAGGCTTTGATGTAATCGATAGAATAAAGTCTAAAGTAGAGAGCATATGCCCCAATACTGTCTCTTGTGCTGATATTCTTGCTGTGGCAGCAAGAGACTCAGTTGTTGCTCTTGGTGGACCTAGTTGGAGTGTTCCATTGGGCCGAAGAGATTCAACCACAGCAAGTTTAAGTTCTGCAAACTCAGATTTGCCAGGTCCCTCTTCTGATGTAAGTGGCCTTGCTAATGCTTTCTCCAGCAAAGGTTTTACACTTAGAGAGGTGGTTGCCCTTTCAGgaTCACACTCAATTGGTCAAGCCACATGTAGATTCTTCAGAAACAGGATTTACAACGAGAACAACATAGATTCATCTTTTAAAGCATCATTACAAGCAAATTGTCCTAGATCAGGTGGTGATTTTAATTTGTCACCACTTGACACCACAACTCCAAACACATTTGACAATGTTTATTACAAGAACTTGCAAAATCAAAAGGGTCTCTTTCACTCTGATCAAGTGCTTTTCGATGATGGATCTACAAAGGCACAAGTTAATTCTTATGTTACCAATCCTTTAAGTTTTAGGactgattttgcaaatgcaATGGTCAAAATGGGGAACCTTAGCCCACTTACTGGATCTAGTGGTCAGATTAGAAAAATTTGTGGGAGAGTCAACTAA 951 0.3807 MMLPITKVLFFLLFCFIGTISAQLSSNFYIKTCPLVLPTIKTEIVAAVANEARMGASLLRLHFHDCFVQGCDASVLLDDTSSFTGEKSAGPNANSLRGFDVIDRIKSKVESICPNTVSCADILAVAARDSVVALGGPSWSVPLGRRDSTTASLSSANSDLPGPSSDVSGLANAFSSKGFTLREVVALSGSHSIGQATCRFFRNRIYNENNIDSSFKASLQANCPRSGGDFNLSPLDTTTPNTFDNVYYKNLQNQKGLFHSDQVLFDDGSTKAQVNSYVTNPLSFRTDFANAMVKMGNLSPLTGSSGQIRKICGRVN 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01514 316 PANTHER PEROXIDASE 16 316 - -
Tsu04g01514 316 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g01514 316 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g01514 316 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g01514 316 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g01514 316 PRINTS Plant peroxidase signature 250 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g01514 316 PRINTS Plant peroxidase signature 234 249 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g01514 316 PRINTS Plant peroxidase signature 290 303 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g01514 316 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g01514 316 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g01514 316 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g01514 316 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g01514 316 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g01514 316 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g01514 316 PRINTS Haem peroxidase superfamily signature 236 251 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g01514 316 Gene3D Peroxidase, domain 2 161 295 - -
Tsu04g01514 316 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Tsu04g01514 316 Gene3D - 27 312 - -
Tsu04g01514 316 ProSiteProfiles Plant heme peroxidase family profile. 23 316 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g01514 316 CDD secretory_peroxidase 23 315 IPR033905 GO:0004601|GO:0042744
Tsu04g01514 316 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Tsu04g01514 316 PANTHER PEROXIDASE 72-RELATED 16 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g01514 316 SUPERFAMILY Heme-dependent peroxidases 23 316 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tsu04g01514 316 Pfam Peroxidase 41 279 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01514 Tsu-Chr4 15814431 15818335 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01514 20 316 Peroxidase AT5G05340 61.538 9.45e-138 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01514 K00430 - gmx:100815142 490.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g01514 04 15814431 15818335 Tsu04g01514 04 15814431 15818335 ECH
Tsu04g01514 04 15814431 15818335 Tsu05g02983 05 40142293 40147323 ECH
Tsu04g01514 04 15814431 15818335 Tsu03g00793 03 7229838 7234090 ECH
Tsu04g01514 04 15814431 15818335 Tsu06g00766 06 6831628 6833473 PCT