Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01491 ATGAAATATTCTTATGACGTGTTTGTTAGCTTCAGAGGCGCAGACACGCGGTGCAATGTTGCCGATCATCTTTTTGCTGCTCTCAAAAGAAAAGGAATTGTTTCATTTAAGGATGATAAAAATCTCAGGAAAGGTGAATCCATAGCACCTGAGCTCCGTCGTGCAATTGAAGGATCACGGATATTTATCGTGATTTTCTCAAAGAACTATGCTTTCTCAACATGGTGCTTGCGTGAACTGGATCATATCCTTTATTGTGCTCTAATATCTGGAAGACGTGTTCTGCCTATTTTCTATGATGTTGATCCATCTGAGGTGAGACACCAAAAAGGAAGTTACGATAAAGCCTTTGAAAAACATGAACAAAGGCTCCGGCATGACTTAGATTTGGTGAGAAGATGGAGAACAACTCTAACACGAGTGGCCAATATCTCCGGCTGGGACTTACGCCACAAGCTTCAATATGCGGAGATTGAAAAGATTGCTCAACAGATAATGAATTCATTGGGTCACAAGTTTTCAAGCCTTCCAAGAGATTTAGTGGGGATGGCTTCTCCTTTAGAAGAATTGGAAGAACAAGTATTTTTGGATTCGGCTAATGATGTTCGGGTTATAGGAATTTGCGGGATGAGAGGAATAGGGAAATCAACCCTTGCTGCTGTTTTATATGACAGAATCTTTCATGAATTTGAAGCATGCTGTGTTATCGATGATGTGAGCAGAATTTACAGAGTCGATGGCCCGATTGGTGCACAAAAGCAAATTCTACTTCAAATGCTAAAGGAAGAACACCTTCAGGTAAGCAATCCTTATGAGGCAACTATTTTGATACGAAGCAGGATGCTTCATTTAAAGGCCCTTGTAATTCTTGATAATGTTGATCGAATTGAACAACTGGAGAAATTAGCCGTAAATCGTGAATGTTTTGCTGCAGGGAGTAGAATCATTATAATTTCTAAATATGAGCACATCTTAAAAGAGTATGGAGTTGATGGAGTTTACAAAGTTCCACTCTTAAATAAAACTAATTCTCTTCAATTATTATTCCATCAAAAAGTTTTCAAATGTACTGATATTACTAGTTATTATGAACAATTGGCATGTGACATGCTACATTATGCAAATGGCAGACCTCTAGCTATTAAAATATTGGGTTCATTTTTGTTTACCCTACATATCTCTCAATGGAGAAATGTATTGATTAGATTGAGAGAAAGTCCAAACAAAGATATTATAGATGTGCTACAGTCAAAGTACCGATACCCGCTACAACCTCCTTTGTATCAGTACAATGGACGGCAACTCTGTCGCGGTCAAACCAGTTGTGCTGTGAGGGATCAGCCTGGTGGTGATGAGCAAAAACACATACAGGGTTATCATGTGCAACCTTCACTATTGTCCAATTTATACCCCTTTGGGCCGGGGTTTAACTATCGTTCGCTTATGTTCAATGATGAGAGCGGTAATTCGTGTTCCATCatgtga 1485 0.3892 MKYSYDVFVSFRGADTRCNVADHLFAALKRKGIVSFKDDKNLRKGESIAPELRRAIEGSRIFIVIFSKNYAFSTWCLRELDHILYCALISGRRVLPIFYDVDPSEVRHQKGSYDKAFEKHEQRLRHDLDLVRRWRTTLTRVANISGWDLRHKLQYAEIEKIAQQIMNSLGHKFSSLPRDLVGMASPLEELEEQVFLDSANDVRVIGICGMRGIGKSTLAAVLYDRIFHEFEACCVIDDVSRIYRVDGPIGAQKQILLQMLKEEHLQVSNPYEATILIRSRMLHLKALVILDNVDRIEQLEKLAVNRECFAAGSRIIIISKYEHILKEYGVDGVYKVPLLNKTNSLQLLFHQKVFKCTDITSYYEQLACDMLHYANGRPLAIKILGSFLFTLHISQWRNVLIRLRESPNKDIIDVLQSKYRYPLQPPLYQYNGRQLCRGQTSCAVRDQPGGDEQKHIQGYHVQPSLLSNLYPFGPGFNYRSLMFNDESGNSCSIM 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01491 494 Gene3D - 338 421 IPR042197 -
Tsu04g01491 494 Gene3D - 167 331 IPR027417 -
Tsu04g01491 494 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 415 IPR044974 GO:0006952
Tsu04g01491 494 Gene3D - 2 166 IPR035897 -
Tsu04g01491 494 ProSiteProfiles TIR domain profile. 3 169 IPR000157 GO:0007165
Tsu04g01491 494 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 147 IPR035897 -
Tsu04g01491 494 Pfam NB-ARC domain 195 409 IPR002182 GO:0043531
Tsu04g01491 494 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 7 415 - -
Tsu04g01491 494 Pfam TIR domain 5 175 IPR000157 GO:0007165
Tsu04g01491 494 PRINTS Disease resistance protein signature 374 388 - -
Tsu04g01491 494 PRINTS Disease resistance protein signature 280 294 - -
Tsu04g01491 494 PRINTS Disease resistance protein signature 204 219 - -
Tsu04g01491 494 SMART till_3 4 144 IPR000157 GO:0007165
Tsu04g01491 494 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 173 420 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01491 Tsu-Chr4 15332032 15333625 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01491 5 387 WRKY Transcription Factor Family AT4G12020 25.781 4.71e-29 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01491 - - cam:101512606 617.076