Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01465 atgggTGGCTGCTGCAGCCACGATGTTTCTGTTCGTGGCAGAGTTGAAAGTGAGATTGATGATGGTGATTATGAAGATTATGAGGATATTAATGATGTCATGTATGAAAATGATGGAGCAATTGTTAGGGTAAGAGGTTTTTCTAAGTCTGTATCAATGTTTACCCAACAAGGTTTGAAAGGTGTTAACCAAGATTCAATGACTGTTTGGGAGGACTATACCGGAGAACCAGGAATGATCTTTTGCGGTGTGTTCGATGGTCATGGTCCTCTAGGCCACAAAGTTTCGCAATTTATCCGTGACAATCTTCCCTCAAAACTATCTGAAGCAATCAAAATGGCACAAGAGAAGTCCTTCAAATACTATGATGCCAATGATGCAGATACCGAAACTTTCCATGATGCCTACAATGATAGTAACCGCCATAACAACATAACCCTTCCTTCATGGGAAGGATGTTTTCTGAAATCCTTCGATGAAATGGATGATCATCTTGCTCAGGAAGTTAACACGGATAGCTATTGCAGTGGTTGCACAGCTGTAACTGTAATTAGACAGGGTGACCAGTTGATAGTTGGAAATTTGGGCGATTCTCGTGCAGTTCTTTGCACAAAGGATAGAGATCAACTAATTTCTGTTCAACTTACCGTTGACTTGAAACCGGAAATTCCAAGTGAAGCCTCAAGAATCTTTAACTGTGAAGGTAGAGTTTTTGCTGCAGAAGAAGAACCGGATGTATACAGATTATGGATGCCTGATGATGACTGTCCTGGACTAGCTATGTCAAGAGCCTTTGGAGACTTTTGCCTAAAAGATTATGGCCTCATTGCAGCTCCAGATGTGTTTTATCGAAAAATTACCGAACAAGATCAATTTGTTGTTTTGGCAACTGATGGCatatGGGATGTGCTGACGAACAATGAAGTAGTAAACATAGTTGCTTCAGTGCCAAGAAAGTCAACAGCAGCAAAGATATTAGTAAAGCGCGCCGTTAGAGCCTGGAGATACAAGTATCCCGGATCAAAGATTGACGATTGTGCAGCTATATGTTTGTTTCTTGATGATCATCAATCTGTTCTATCACATTCTCAGTCCACTAATACGAGAAGAAGTCGACATCATCGCAGCAAACACTCAAACAGCAAACACTCAGGAAGCAAGCATTCAAGATCACATAGAAAAAGTGAAGACAATGAAACTGTGGCTGGAAAAGTTGGAGTTCAGTTGGATGAAGAATGGACAGCACTTGGAGGGTTAGCTAGAGCAAATTCAATATCAAAACTTCCAAGACTTGCTAGAAATATGAGTAAAAGACAATCATCATCTAAGCGCCTTCTTGGAAGTTGA 1347 0.4046 MGGCCSHDVSVRGRVESEIDDGDYEDYEDINDVMYENDGAIVRVRGFSKSVSMFTQQGLKGVNQDSMTVWEDYTGEPGMIFCGVFDGHGPLGHKVSQFIRDNLPSKLSEAIKMAQEKSFKYYDANDADTETFHDAYNDSNRHNNITLPSWEGCFLKSFDEMDDHLAQEVNTDSYCSGCTAVTVIRQGDQLIVGNLGDSRAVLCTKDRDQLISVQLTVDLKPEIPSEASRIFNCEGRVFAAEEEPDVYRLWMPDDDCPGLAMSRAFGDFCLKDYGLIAAPDVFYRKITEQDQFVVLATDGIWDVLTNNEVVNIVASVPRKSTAAKILVKRAVRAWRYKYPGSKIDDCAAICLFLDDHQSVLSHSQSTNTRRSRHHRSKHSNSKHSGSKHSRSHRKSEDNETVAGKVGVQLDEEWTALGGLARANSISKLPRLARNMSKRQSSSKRLLGS 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01465 448 MobiDBLite consensus disorder prediction 362 403 - -
Tsu04g01465 448 PANTHER PROTEIN PHOSPHATASE 2C 65-RELATED 1 409 - -
Tsu04g01465 448 Pfam Protein phosphatase 2C 81 331 IPR001932 -
Tsu04g01465 448 MobiDBLite consensus disorder prediction 429 448 - -
Tsu04g01465 448 SUPERFAMILY PP2C-like 45 355 IPR036457 -
Tsu04g01465 448 CDD PP2Cc 50 353 IPR001932 -
Tsu04g01465 448 MobiDBLite consensus disorder prediction 424 448 - -
Tsu04g01465 448 Gene3D - 42 355 IPR036457 -
Tsu04g01465 448 SMART PP2C_4 41 351 IPR001932 -
Tsu04g01465 448 ProSiteProfiles PPM-type phosphatase domain profile. 50 353 IPR001932 -
Tsu04g01465 448 PANTHER ALPHABET, ISOFORM E-RELATED 1 409 - -
Tsu04g01465 448 MobiDBLite consensus disorder prediction 367 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01465 Tsu-Chr4 15139502 15142239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01465 1 386 PP2C-type Phosphatase Gene Family AT5G01700 50.518 3.37e-130 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01465 - - mtr:MTR_7g070510 698.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g01465 04 15139502 15142239 Tsu04g01465 04 15139502 15142239 ECH
Tsu04g01465 04 15139502 15142239 Tsu06g00316 06 2577707 2579892 PCT