Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01457 ATGTCTATGTACACTTTCAATGCTGATTCTGAAGATCATCATTACTTCTCTAGTACAAAGCGAAGAAAACTTTGCGATTTCGAGAGTCATATGACGGGAAACGGATTGAGGTTGATGGAGAAGATGGGTTATAAAGGAGGTGGTCTTGGGAAGAATGAGCAAGGTATATTGAATCCTATTGAGGTCAAACTTAGGCCTCAATTTTCCGGTCTAGGATTTAACAAATCGAAGGAGACTCCCACTTTGCAGACGGAGAAAAAGAGCGAACCGGGAGGAGGCGTGCAACCTATAGTTGGAAGGAAGAGAGAACGTGCATGGTTAAAccagaagaagaaagaagaggaaGTGTATGTAACTGCTGAGGATTTCTTGGCGAGCAAGCAAGAACAAGTTTTTCAGAAGATTTATGATATGAGGGGGCCACAGGTAAGAGTGTATACAAATTTGTGTTATTTGAATGCTGAGGAGAAAGCAAAGGAAAAAGATGTCCCAATGGCTGAACTGCAGTATTTCGTAGGACTAATAGTTCCGTTGGCCGAGGTTGACATCCAAAAGATTGATAGAAATTTGAGGAATGAGAAGGATATAGcatttagtttgaaaaatgaaaaagagaagTTGGAAGATGAGGCAGCATTTCAAAAGAAGCAGCTTGATAATTATGAGAATATAAAGAGTGTTCTTGACCGTGTCGAAGAAGAAAAGACCTTAGGAACATTAACATTGGATTCCCTTGCTCAATGCTTTAGGGACATTCACAAAAGATATACTGAGGACTATAAGTTGTGGAATTTTTCATACATTGCTTGCTCATATGCTTTGCCTTTGTTTATCAGAGTGTTCAAAGGATGGGATCCTCTTCAAAGTCCATCTCATGGATTGGAATTGGTTTCACAATGGAAGACAttgcttcaagaagatgattGTTTTGATATATGGGACATTAACATATCATCACCTTATGCTGATTTCGTTTTCGAGGTTGTATTGCCGGCTGTTAGAATACCTTGTATCAATACATGGGATGCACGCGTTCCTGAGCTGATGCTACGGTTTTTGGAGTCTTGGGAAAAATTGCTTCCTTCTTCAGTTATTGCTGATATATTAGACAAGATAGTCTTGCCAAAACTATCAAGTGCCGCAGATACTTGGGAGCCACATCGCGAGACGATTCCTATTCACACATGGGTACATCCATGGCTACCTCTACTAGGGAATAAGTTGGATGGTATCCACCAGACGATTCATCTCAAATTTAGTACTTTTCTTAGTCAATGGCACCCGAGTAATGATGGTTCTGTATATGCTTTATTGTCCCCTTGGAAGACTGTATTTGATGCTGATAGTTGGCAGCAACTTATGCACCGTTTTATTGTACCGAAGCTGAAGGCTATCTTGAAAGACGACAAATTTCAAGTGAACCCGGCAAGTCAGAATCTTGATCAATTTTATTGTGTGATGAACTGGGCTTCGGCTATTCCGATTCATCTAATGGTTGACACGCTGGAGATCTTCTTTGACAAGTGGCTCAAAGTTTTATATCACTGGTTGTGCTCAAATCCTAACTTTAATGAAGTTACAAAATGGTATTTGGGCTGGAAAGAACTTATTCCAAAAGAACTTTTGGCAAATAAAAGTATTCAATACAAGCTCAAATGCGGTCTTGATATGATGAATCAGGCTGTTGAAGGTATGGAGGTGGTGCAACCTGTTCTGAAGGAGAAGATAGCAGCAGCCTCTTTTCAACAACAGGCAGCTGCAAGCTTGGTCGATGCTATCAAAGTCGATGGTGCGAATGAAATGAGCATGAAAGAACTCATTGAGGCCTATGCTCAAGATAATGGTTTACTTTTCAAACTTAAACCTGGTAGAAAGCACAATGGCCATCAAATATATGGGTTTGGCAATGTCAGCATAGTAATCGACTCTTGGAATCAAAAGGTCTATGCCCAAAATGACGAAACATGGTCTTTAGGAACTCTCGAACGATTACTTGAGTTACAAAAAAGACGCTGA 2016 0.3899 MSMYTFNADSEDHHYFSSTKRRKLCDFESHMTGNGLRLMEKMGYKGGGLGKNEQGILNPIEVKLRPQFSGLGFNKSKETPTLQTEKKSEPGGGVQPIVGRKRERAWLNQKKKEEEVYVTAEDFLASKQEQVFQKIYDMRGPQVRVYTNLCYLNAEEKAKEKDVPMAELQYFVGLIVPLAEVDIQKIDRNLRNEKDIAFSLKNEKEKLEDEAAFQKKQLDNYENIKSVLDRVEEEKTLGTLTLDSLAQCFRDIHKRYTEDYKLWNFSYIACSYALPLFIRVFKGWDPLQSPSHGLELVSQWKTLLQEDDCFDIWDINISSPYADFVFEVVLPAVRIPCINTWDARVPELMLRFLESWEKLLPSSVIADILDKIVLPKLSSAADTWEPHRETIPIHTWVHPWLPLLGNKLDGIHQTIHLKFSTFLSQWHPSNDGSVYALLSPWKTVFDADSWQQLMHRFIVPKLKAILKDDKFQVNPASQNLDQFYCVMNWASAIPIHLMVDTLEIFFDKWLKVLYHWLCSNPNFNEVTKWYLGWKELIPKELLANKSIQYKLKCGLDMMNQAVEGMEVVQPVLKEKIAAASFQQQAAASLVDAIKVDGANEMSMKELIEAYAQDNGLLFKLKPGRKHNGHQIYGFGNVSIVIDSWNQKVYAQNDETWSLGTLERLLELQKRR 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01457 671 MobiDBLite consensus disorder prediction 71 100 - -
Tsu04g01457 671 ProSiteProfiles G-patch domain profile. 31 76 IPR000467 GO:0003676
Tsu04g01457 671 SMART G-patch_5 30 74 IPR000467 GO:0003676
Tsu04g01457 671 Pfam G-patch domain 35 72 IPR000467 GO:0003676
Tsu04g01457 671 PANTHER TUFTELIN-INTERACTING PROTEIN 11-RELATED 19 663 IPR045211 GO:0000390
Tsu04g01457 671 Coils Coil 190 234 - -
Tsu04g01457 671 Pfam GC-rich sequence DNA-binding factor-like protein 242 513 IPR022783 -
Tsu04g01457 671 PANTHER TUFTELIN-INTERACTING PROTEIN 11 19 663 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01457 Tsu-Chr4 15056914 15058929 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01457 35 72 C2H2 Transcription Factor Family AT5G26610 57.895 5.38e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01457 K13103 - gmx:100781621 924.85