Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01447 AtgctttttattcttttcttcatctttcagTTCTGTTTCCATCCCGTCGTTTCTCTCACCTCTGACGGCCTCGCCCTTCTAACACTCAAATCCGCCGTTGACGGAGACGCCGAAACCGCATTCTCCGACTGGAACGAAGACGACATTACGCCGTGTCATTGGTCCGGCATTAGCTGTGCTAACATCTCCGGCGAGTCAGACTCTCGTGTAGTCGGTATCGCTCTCGCCGGAAAAGGCCTCCGTGGTTATCTCCCGTCGGAGCTCGGAAAGTTAATCTATCTCCGTCGCCTGAGTCTTCATACTAATCTCTTCCACGGCTCCATTCCCGTTCAGCTCTTCAATGCCACCTCTCTCCACAGTATCTTCCTCCACGGTAACAATCTCTCCGGTAACATTTCTCCTTCAATCTGCAACCTTCCACGCCTACAAAACCTTGACCTCTCCGAAAATTCACTCGCCGGAGTTATCCCGGAGTCTCTCGGAAACTGTTCCCAGCTTCAACGACTCATTCTCGCGAGAAATAATTTTTCCGGTGATATTCCGGTGAATCCATGGCCGACGCTGAAAAACCTCGTTCAGCTCGATCTTTCCGCGAATCTTCTAGAAGGTTCGATTCCAGAACAAATCGGCGATCTCAATTCCCTCACCGGAACCCTAAACCTCTCATTCAACCACTTATCAGGTAAAATCCCGAAATCTCTAGGAAAATTGCCGGTAACGGTTAGTTTCGATCTTCGAAACAACGATCTAAGCGGTGAAATTCCTCAAACCGGGTCGTTTTCGAATCAGGGACCCACCGCGTTTCTCAATAACCCGAAACTATGTGGGTTTCCACTTCAAAAACAGTGCACCGGTTCAGCGCCAAGTGAACCGGGGACTAGTCCCGGTTTAGCTCGACAGCACGTGAACCGGTCTAAGAAAGGGTTGAGTCCcggtttgattattattataactgTGGCTGATGCTGCTGTTGTGGCTTTGATTGGGCTTGTTGTTGTGTATGTGTattggaaaaagaaagataaGTCTAATGGGTGTAGTTGTACTTTGAAGAGGAAATTTGGTGGTAGTGGAAACAATGAAAGAtcaaatttgtgttgtttttgttggtCTTTAGGGTGTGTTAAAGGGTTTAAGAGTGATGATTCTGAGATGGAAGAGAGTGAgaaaggaggaggaggaggtggtggtggtggtggtgggagAGGGGAAAGTGAAGGTGAAGGTGAATTGGTGGCAATTGATAAAGGTTTTAGCTTTGAACTTGATGAGTTATTAAGAGCTTCTGCATATGTGTTAGGGAAAAGTGGGTTAGGGATTGTGTATAAGGTTGTGCTTGGGAATGGTGTACCTGTGGCTGTGAGGAGATTAGGGGAAGGTGGTGAACAAAGGTATAAGGAATTTGCTGCTGAGGTTCAAGCTATTGGTAAAGTGAAACATCCTAATATTGTGAAGTTGAGAGCTTATTATTGGGCTCATGATGAAAAGCTTTTGATTAGTGATTTCATCTCCAATGGCAATTTGGCTAATGCTCTTAGAGGAAGAAATGGCCAACCATCTCCAAATCTTTCATGGTCAACCAGGCTGAAAATAGCCAAAGGAACAGCCAGGGGTTTAGCTTATCTCCATGAATGCAGTCCAAGAAAATTTGTTCACGGCGACATCAAACCTTCCAATATCCTCCTTGACACAGACTTCCAACCTCTCATTTCTGATTTTGGTCTTAACCGGCTGATCAGCATCACTGGAAACAATCCCTCCACCGGCGGTTTTATGGGTGGAGCTCTTCCTTACTTGAAATCATCACAAACCGAACGAATCAACAACTATAAAGCACCTGAAGCTAAAGTACCAGGCTGCAGACCTACCCAAAAATGGGATGTGTATTCATTTGGTGTTGTATTACTTGAATTGCTAACTGGTAAGTCCCCGGATTCTTCTCCAGGAGCATCAACTTCTGTGGAAGTGCCTGATTTGGTAAGGTGGGTAAAGAAAGGGTTTGAACAAGAAAGCCCTTTATCTGAAATGGTTGATCCATCACTTCTTCAAGAAATCCATGCCAAGAAAGAAGTACTAGCTGTGTTCCATGTAGCACTATCATGCACTGAGGGAGACCCTGAGGTCAGGCCTAGAATGAAAACTGTCTCTGACAATCTTGAAAGAATTTGA 2169 0.4306 MLFILFFIFQFCFHPVVSLTSDGLALLTLKSAVDGDAETAFSDWNEDDITPCHWSGISCANISGESDSRVVGIALAGKGLRGYLPSELGKLIYLRRLSLHTNLFHGSIPVQLFNATSLHSIFLHGNNLSGNISPSICNLPRLQNLDLSENSLAGVIPESLGNCSQLQRLILARNNFSGDIPVNPWPTLKNLVQLDLSANLLEGSIPEQIGDLNSLTGTLNLSFNHLSGKIPKSLGKLPVTVSFDLRNNDLSGEIPQTGSFSNQGPTAFLNNPKLCGFPLQKQCTGSAPSEPGTSPGLARQHVNRSKKGLSPGLIIIITVADAAVVALIGLVVVYVYWKKKDKSNGCSCTLKRKFGGSGNNERSNLCCFCWSLGCVKGFKSDDSEMEESEKGGGGGGGGGGGRGESEGEGELVAIDKGFSFELDELLRASAYVLGKSGLGIVYKVVLGNGVPVAVRRLGEGGEQRYKEFAAEVQAIGKVKHPNIVKLRAYYWAHDEKLLISDFISNGNLANALRGRNGQPSPNLSWSTRLKIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDTDFQPLISDFGLNRLISITGNNPSTGGFMGGALPYLKSSQTERINNYKAPEAKVPGCRPTQKWDVYSFGVVLLELLTGKSPDSSPGASTSVEVPDLVRWVKKGFEQESPLSEMVDPSLLQEIHAKKEVLAVFHVALSCTEGDPEVRPRMKTVSDNLERI 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01447 722 Gene3D Phosphorylase Kinase; domain 1 410 502 - -
Tsu04g01447 722 SMART serkin_6 431 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g01447 722 MobiDBLite consensus disorder prediction 385 406 - -
Tsu04g01447 722 PRINTS Leucine-rich repeat signature 188 201 - -
Tsu04g01447 722 PRINTS Leucine-rich repeat signature 142 155 - -
Tsu04g01447 722 ProSiteProfiles Protein kinase domain profile. 427 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g01447 722 SUPERFAMILY Protein kinase-like (PK-like) 432 719 IPR011009 -
Tsu04g01447 722 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 3 722 - -
Tsu04g01447 722 CDD STKc_IRAK 433 722 - -
Tsu04g01447 722 Gene3D Ribonuclease Inhibitor 185 285 IPR032675 -
Tsu04g01447 722 Pfam Leucine rich repeat N-terminal domain 21 59 IPR013210 -
Tsu04g01447 722 ProSitePatterns Serine/Threonine protein kinases active-site signature. 550 562 IPR008271 GO:0004672|GO:0006468
Tsu04g01447 722 Gene3D Ribonuclease Inhibitor 21 184 IPR032675 -
Tsu04g01447 722 Gene3D Transferase(Phosphotransferase) domain 1 503 722 - -
Tsu04g01447 722 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 3 722 - -
Tsu04g01447 722 SUPERFAMILY L domain-like 21 280 - -
Tsu04g01447 722 Pfam Protein kinase domain 432 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01447 Tsu-Chr4 14978412 14983498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01447 15 722 Receptor kinase-like Gene Family AT1G67510 70.124 0.0 993
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tsu04g01447 Pkinase 3.6e-31 CL0016
TF S1Fa-like Tsu04g01447 Pkinase 3.6e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01447 - - gmx:100795021 1125.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g01447 04 14978412 14983498 Tsu06g00332 06 2741102 2748786 PCT