Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01433 atgaatcaaaattgGCCTAGAAAGTGCACATATTCACTTGTTCATGTGTTTAGAACTATACATAGAGTGGATGTATATAGCTTTGGGATTATCTTGTGGGAGTTAATCACTGGTATGCTTACATTTCAGAACATTATAGTTGTACAAGCAGCATTTGCAGCTGTCCAGAGAAATGCTTGCCCGATCTTGCCTAATGATTGTTTGCCTGTTCTTTGTGAGATTGTGACAAGGTGTTGGGATGCCATCCCTGATGTTAGGCCACCCTTCACTGAAATTGTTGAAATTGATGCTTGA 294 0.3844 MNQNWPRKCTYSLVHVFRTIHRVDVYSFGIILWELITGMLTFQNIIVVQAAFAAVQRNACPILPNDCLPVLCEIVTRCWDAIPDVRPPFTEIVEIDA 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01433 97 Pfam Protein tyrosine and serine/threonine kinase 21 94 IPR001245 GO:0004672|GO:0006468
Tsu04g01433 97 PANTHER BNAA09G41440D PROTEIN 22 94 - -
Tsu04g01433 97 Gene3D Transferase(Phosphotransferase) domain 1 11 96 - -
Tsu04g01433 97 ProSiteProfiles Protein kinase domain profile. 1 97 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g01433 97 PANTHER SERINE-THREONINE PROTEIN KINASE 22 94 - -
Tsu04g01433 97 SUPERFAMILY Protein kinase-like (PK-like) 22 94 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01433 Tsu-Chr4 14790219 14790714 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01433 21 95 MAP Kinase Kinase Kinase AT2G24360 66.667 7.03e-34 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Tsu04g01433 PK_Tyr_Ser-Thr 2.7e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01433 - - mtr:MTR_3g034100 122.864