Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01427 atgaatcaaaattgGCCTAGAAAGTGCACAGATGCACTTGTTCATGTGTTTGGACCTATACATAATGTGGATGTATATAGCTTTGGGATTATCTTGTGGGAGCTAATCACTGGTATGCTTACATTTCAGAACATTATAGCAGTACAAGCAGCATTTGCAGTTGTCCAGAGAAATGCTTGCCCGATCTTGCCTAATGATTGTTTACCTATTCTCTGTGAGATCATGACAAGGTGCTGGGATGCCAACCCTGATGTTAGGCCACCCTTCACTGAAATTGTTGAAATTGATGCTTGA 294 0.398 MNQNWPRKCTDALVHVFGPIHNVDVYSFGIILWELITGMLTFQNIIAVQAAFAVVQRNACPILPNDCLPILCEIMTRCWDANPDVRPPFTEIVEIDA 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01427 97 ProSiteProfiles Protein kinase domain profile. 1 97 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g01427 97 PANTHER SERINE-THREONINE PROTEIN KINASE 22 94 - -
Tsu04g01427 97 Gene3D Transferase(Phosphotransferase) domain 1 14 96 - -
Tsu04g01427 97 Pfam Protein tyrosine and serine/threonine kinase 22 94 IPR001245 GO:0004672|GO:0006468
Tsu04g01427 97 PANTHER BNAA09G41440D PROTEIN 22 94 - -
Tsu04g01427 97 SUPERFAMILY Protein kinase-like (PK-like) 22 94 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01427 Tsu-Chr4 14740503 14740796 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01427 21 95 MAP Kinase Kinase Kinase AT2G24360 70.667 1.22e-36 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Tsu04g01427 PK_Tyr_Ser-Thr 6.1e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01427 - - mtr:MTR_3g034100 131.724