Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu04g01400 | ATGCCTAAGCGACCGTTTGGGGCTATGTTGGGGGAAGGAAGTGCAAGTTCCAGTTCTAGTTCTAGTTCTTATAAGGATTATATATATGATGTGTTTATCAGCTTCAGAGGTACTGACACGCGCAACACTTTCGTTGACCATCTCTACGCTCATCTCACTAGAAAAGGTATTTTTGTCTTCAAAGATGACAAACAACTTCAAAAAGGTGAATCCATCTCACCTCAACTTCAACAGGCAATTCAACATTCACGACTTTCTATTATTGTTTTCTCAAAAGATTATGCTTCCTCAACTTGGTGTTTAGATGAAATGGCTGCTATTGCTGATTGTCGTGCTGATTTGAAACAAATTGTGTTTCCTATTTTCTATGATGTGGATCCATCTCATGTACGAAAGCAAAATGGAGTTTATGAGAGTGCTTTTGTTTTACACACTAAGACATTCAAAGATGATCAACACAAGGTTGATAGGTGGAAGAGAGCTATGACTTGTTTCGCTGGATTAGTTGGTTGTGATGTCAGGAATAAGCAAGAAGTTGAAGAGATTGAAAATATTGCCCAGACTGTAATAGAAAAGTTGGGTCATAAATTTTCAGGGTATGCTGATGACCTTATCGGAATACAACCTCAAGTAAAAGCATTAGAAAAACTTTTAAAACTAAGCTCACATGATGACCATTGTCTAGTTTTAGGAATATGGGGGATGGATGGCATAGGAAAGACGACTCTTGCAACTGTCTTGTATGACAAAATCTCACATCACTACCAATATGGTGCTTGTTGTTTTATCCACAATGTTAGCGCAATTTATAAAGATGGTGGTGCTATTGCTGTCCAGAAACAGATTCTTCAACaaactctgaaagaaaaaaatctggATGAATACAGTCCCTCTGAAATATCTGGAATTATAACAAAGAGGCTATTTAACAGGAAAATCCTTATAGTTCTTGACGATGTTGATCAAATTGAGCAGCTACAAGAATTGCACATAAAGACCAAATTGCTTTGTCCTGGAAGTAGAATAATCGTAACCACTAGAGATGTGCATATTCTTAAATTGTTTGGAACGCATAAAATTCACAAGGTCAAATTGATGAACGAAAATGATGCTCGGGAACTTCTATGCAGAAAAGCCTTTAAAACTGATAATTCAAGTGGTCATGCAGAACTTATTCCTAAGGTGCTAGAATACACTCAAGGTCTTCCATTAGCAATTAGAGTAATGGGTTCTTTCTTGTATCAGAGACCAACCACTCAATGGAGAGCTACCTTGGAAAGATTGAAGAATAATCCAAATAGTGGAATTAACAAAGTGCTTCAGTCGAGTTTCAAGGGACTCGATGacatagaaaaagaaatatttttgcaCGTTGCTTGTTTCTTTGAAGGGGAGAGGGAGGATTATGGGAGGCGAATTCTAGATGCTTGTGGAACACAACCTGATATTGGAATTTCACTTCTTGCTGAAAAGTCATTCATAACCATTACAAACCAGGAAATTCATATGCATAAAATGTTGCAAGAGCTGGGGAAGCAAATTGTTCGGGAACAACATCCTGATGAGCCAAGATTATGGAGTAGATTGTGGCTTTATCGTGATCTTCATGATGCGATGATTACAAAACTGGAAGTAATAAAAGCTAAAGCCataattttaaatcaaaagGAGGatgtttctaatttcaatcagctGAGTGATGAAGATTTaccaaaaattgaaaacttgAAAGTGCTCAtattaaataattcaaatttttcagGAAGCCCCAAATTTCTTTCTGATTCCCTATGCTATCTTATGTGGAAAGGTTACCCTTTCAGGTCTTTTCCATCAAAATTTCAACCATATAATCTTGTGGAATTGAATATGCCTAATAGCAACATTGAACAATTGTGGATAGGCATCCAGCGTCTCCCCAAATTAAAAAGGATGGACCTTAGCAACTCCAAAAATCTGAAGGTGACTCCGTGCTTTGAAGTGATACAAAATCTTGAGCGGCTAGATTTTACAGGATGCATTAACTTGTTGGAGGTGCATCCATCAATTGGACTTCTTACAAAACTTGTATTCTTGAGTTTGCATAACTGTACTAGTCTAGTCACCCTTGATTTTGGAAATGCAACAAGATTAAGGTCTCTAAAAGTTTTGCATCTCTCTGGATGTACAAAACTTGAAAAAACGCCGAATTTTAGTGGCTTATCAAATCTCGAGTACCTTGATATGGATCGATGTGCAAGTTTATCCACACTTCATGAATCTGTTGGGGCTCTTGCAGAGCTTAGATTTTTAAGTTTGAGATACTGCAAAAATCTTGTTGAAATACCTGCACAAATAATGAGATCTCTTACAACTCTAGATCTTTTTGGATGCTTTAAATTTAATAAGCTGCTATTGAATCGGATTTCCAATTCTTCTCTGCAATCTTTGATTTTTCTAGACTTAAGTTTTTGCAATATTTCTGAAGTACCTAATGCTATTGGAGAATTCAAGTGTTTAGAAAGACTAAATCTTCAGGGAAATAACTTTACTGAACTACCCTCCAGTTTTGGTAGACTTCACAATCTATCATATTTAAACTTGTCACATTGTCATAAGCTTCAAAGTTTGCCTTATCTCCCAACACAAAGTGGTCCATCAGATTCAGTGGGAAGATATTTTAAGACAACATCTGGATCCCGTAATCATAGATCAggattatatatttttgactCTCCCAATTGCATGATGATAAGATCCTCCTCTAGAGAATATTCCTATCAGCACTTCATTAAATGGGTGCCAAGACTAGTTAAGAATCCTGCTCACTTTCGGTGTGGCTTTGACATTGTTCTTCCTTGGCATGAGGAAACTGGCTATGGAAATCGAATCATTGCAAAGACTTTCCATCACTGGTTTAAAGGAGGTTCAATATTAAGGATAAATGACCCTGTTATGGATGTTGACTGGCTCGGCTTTCTCTTTTATGTAAAATTTGAGTTAAGTTTTCATCCTGTACTATCTAGTTATTCACATCAATCGCTCTCTTCGTCACTACCACATcctttttatctttcttttgagAGTGAATACACAGAAGAACGATTTGATATGCCACTTAATTTGGAATCAAACCAGGTTGATGGAAAACATTACCTTTGGATGATCTATATCTCTCGGCAACATTGCCATTTTGTAAAAACAGGAGCACACATCACATTAAAATCCCGCCAAGGTTTGATTATCAAGGAATGGGGGTTACGTGCCATAACCAAGAAAGACACAGAGGACTCAAGAATGAAAAGGAGCGTACATCTTTCTTTAGAGAATGTGAAAGTAAAACAAAGAAACACCAGCAGCTTTGAGCCTAAAATCCAACTTCCTTACAATTGGTTAGTTTCTGACAAAGATGAAGCTGAGAGGGATGAAGCCAAGGGAAAAGAAACTGATCTCTTCAGTCTTGGCCTTTTTACTGAAATATCACAGTGA | 3468 | 0.3576 | MPKRPFGAMLGEGSASSSSSSSSYKDYIYDVFISFRGTDTRNTFVDHLYAHLTRKGIFVFKDDKQLQKGESISPQLQQAIQHSRLSIIVFSKDYASSTWCLDEMAAIADCRADLKQIVFPIFYDVDPSHVRKQNGVYESAFVLHTKTFKDDQHKVDRWKRAMTCFAGLVGCDVRNKQEVEEIENIAQTVIEKLGHKFSGYADDLIGIQPQVKALEKLLKLSSHDDHCLVLGIWGMDGIGKTTLATVLYDKISHHYQYGACCFIHNVSAIYKDGGAIAVQKQILQQTLKEKNLDEYSPSEISGIITKRLFNRKILIVLDDVDQIEQLQELHIKTKLLCPGSRIIVTTRDVHILKLFGTHKIHKVKLMNENDARELLCRKAFKTDNSSGHAELIPKVLEYTQGLPLAIRVMGSFLYQRPTTQWRATLERLKNNPNSGINKVLQSSFKGLDDIEKEIFLHVACFFEGEREDYGRRILDACGTQPDIGISLLAEKSFITITNQEIHMHKMLQELGKQIVREQHPDEPRLWSRLWLYRDLHDAMITKLEVIKAKAIILNQKEDVSNFNQLSDEDLPKIENLKVLILNNSNFSGSPKFLSDSLCYLMWKGYPFRSFPSKFQPYNLVELNMPNSNIEQLWIGIQRLPKLKRMDLSNSKNLKVTPCFEVIQNLERLDFTGCINLLEVHPSIGLLTKLVFLSLHNCTSLVTLDFGNATRLRSLKVLHLSGCTKLEKTPNFSGLSNLEYLDMDRCASLSTLHESVGALAELRFLSLRYCKNLVEIPAQIMRSLTTLDLFGCFKFNKLLLNRISNSSLQSLIFLDLSFCNISEVPNAIGEFKCLERLNLQGNNFTELPSSFGRLHNLSYLNLSHCHKLQSLPYLPTQSGPSDSVGRYFKTTSGSRNHRSGLYIFDSPNCMMIRSSSREYSYQHFIKWVPRLVKNPAHFRCGFDIVLPWHEETGYGNRIIAKTFHHWFKGGSILRINDPVMDVDWLGFLFYVKFELSFHPVLSSYSHQSLSSSLPHPFYLSFESEYTEERFDMPLNLESNQVDGKHYLWMIYISRQHCHFVKTGAHITLKSRQGLIIKEWGLRAITKKDTEDSRMKRSVHLSLENVKVKQRNTSSFEPKIQLPYNWLVSDKDEAERDEAKGKETDLFSLGLFTEISQ | 1155 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu04g01400 | 1155 | Pfam | TIR domain | 29 | 197 | IPR000157 | GO:0007165 | |
Tsu04g01400 | 1155 | Gene3D | - | 200 | 360 | IPR027417 | - | |
Tsu04g01400 | 1155 | PANTHER | RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED | 728 | 791 | - | - | |
Tsu04g01400 | 1155 | PANTHER | RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED | 30 | 728 | - | - | |
Tsu04g01400 | 1155 | PANTHER | RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED | 761 | 870 | - | - | |
Tsu04g01400 | 1155 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 18 | 170 | IPR035897 | - | |
Tsu04g01400 | 1155 | PRINTS | Disease resistance protein signature | 399 | 413 | - | - | |
Tsu04g01400 | 1155 | PRINTS | Disease resistance protein signature | 637 | 653 | - | - | |
Tsu04g01400 | 1155 | PRINTS | Disease resistance protein signature | 307 | 321 | - | - | |
Tsu04g01400 | 1155 | PRINTS | Disease resistance protein signature | 229 | 244 | - | - | |
Tsu04g01400 | 1155 | ProSiteProfiles | TIR domain profile. | 27 | 193 | IPR000157 | GO:0007165 | |
Tsu04g01400 | 1155 | SMART | LRR_typ_2 | 807 | 829 | IPR003591 | - | |
Tsu04g01400 | 1155 | SMART | LRR_typ_2 | 830 | 853 | IPR003591 | - | |
Tsu04g01400 | 1155 | SMART | LRR_typ_2 | 734 | 758 | IPR003591 | - | |
Tsu04g01400 | 1155 | Gene3D | - | 26 | 199 | IPR035897 | - | |
Tsu04g01400 | 1155 | Pfam | Leucine Rich Repeat | 618 | 637 | IPR011713 | - | |
Tsu04g01400 | 1155 | Gene3D | - | 365 | 448 | IPR042197 | - | |
Tsu04g01400 | 1155 | Gene3D | Ribonuclease Inhibitor | 543 | 710 | IPR032675 | - | |
Tsu04g01400 | 1155 | Gene3D | Ribonuclease Inhibitor | 801 | 885 | IPR032675 | - | |
Tsu04g01400 | 1155 | Gene3D | Ribonuclease Inhibitor | 711 | 800 | IPR032675 | - | |
Tsu04g01400 | 1155 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 728 | 791 | IPR044974 | GO:0006952 | |
Tsu04g01400 | 1155 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 761 | 870 | IPR044974 | GO:0006952 | |
Tsu04g01400 | 1155 | SMART | till_3 | 28 | 168 | IPR000157 | GO:0007165 | |
Tsu04g01400 | 1155 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Tsu04g01400 | 1155 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 30 | 728 | IPR044974 | GO:0006952 | |
Tsu04g01400 | 1155 | SUPERFAMILY | L domain-like | 563 | 872 | - | - | |
Tsu04g01400 | 1155 | Pfam | NB-ARC domain | 219 | 447 | IPR002182 | GO:0043531 | |
Tsu04g01400 | 1155 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 200 | 457 | IPR027417 | - | |
Tsu04g01400 | 1155 | SUPERFAMILY | "Winged helix" DNA-binding domain | 436 | 536 | IPR036390 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu04g01400 | Tsu-Chr4 | 14390040 | 14397839 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu04g01400 | 709 | 871 | WRKY Transcription Factor Family | AT4G12020 | 34.545 | 5.75e-13 | 72.0 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu04g01400 | - | - | mtr:MTR_5g005550 | 1350.5 |