Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01387 ATGACTGATGTAAATGTTGCTGCATTTGAGGAATTTCTCCATGGTTGGATGATTCGTCAAAGAAACTATCTTGATGATCTTCTCTCAGCTCAACAACAGCAACAAGAGTTGGATGATTCTGATAGATTAAATTTGTTAAACAGAGTAATCTGCCACTATGGACAATACTTTGAAGAGAAATCAAAGATAGCCCATCAAAATATTCTCCTTCTTTTCTCACCACCATGGTTTAGTTCATTAGAAAGAACCTTTCTTTGGGTGGCAGGGTTCAAACCAGGACTTACATTTCAACTTGTGAACAAAACTTTGGAGGATTTGTCAGAGAATCAGAGGCAGAGATTGAGTGAACTCAACCAAGAGACTAAGAGAAAGGAGAGAGAACTCAATGATGAATTAGCTAAGGTTCATGAGAGTATGGCAGGTCCACCTCTTGTTGACATGATTAGAAGCCATGGAAGGGTGTGTTTGAGTAGGTCATTCATGGCAGAAGAGGGTACAGTTCCAAGTACAGTCAAGGAAACATTGGAGAATTTGGTAACAAATGCTGATGCTTTGAGGACTGAGACAGCTTTAAGAGTTGTGCAGATATTGAAACCAGCTCAGGTTCTCAACTTTTTTGTTGCTGTGGCTGAACTTCAGCTTAGGATCAGATCTTTGGGTTTGGATAAGGATGCTCAGAGTGGAAACCAAGGGtga 696 0.4009 MTDVNVAAFEEFLHGWMIRQRNYLDDLLSAQQQQQELDDSDRLNLLNRVICHYGQYFEEKSKIAHQNILLLFSPPWFSSLERTFLWVAGFKPGLTFQLVNKTLEDLSENQRQRLSELNQETKRKERELNDELAKVHESMAGPPLVDMIRSHGRVCLSRSFMAEEGTVPSTVKETLENLVTNADALRTETALRVVQILKPAQVLNFFVAVAELQLRIRSLGLDKDAQSGNQG 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01387 231 PANTHER - 6 229 - -
Tsu04g01387 231 ProSiteProfiles DOG1 domain profile. 6 226 IPR025422 GO:0006351|GO:0043565
Tsu04g01387 231 Coils Coil 100 138 - -
Tsu04g01387 231 Pfam Seed dormancy control 25 100 IPR025422 GO:0006351|GO:0043565
Tsu04g01387 231 PANTHER TRANSCRIPTION FACTOR HBP-1B(C38)-LIKE ISOFORM X1 6 229 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01387 3 220 Calmodulin-binding Proteins AT1G77920 25.893 7.42e-18 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01387 - - gmx:100780874 340.502