Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01260 ATGTCATTCACAGCCACGGCAAACGGCGTTCCGTCGAACTCCACGGTGGCGATGATGTTGGGCCGGCGAAGGATTCCTATACACACATCATTCTATTGGGGTCATAAAGTTGACATACTATTCCATTGCTGGCCCGGGAACAGCGTCCCCATGTATGCGGTGGCGCTGATCCTGGTGTTCGTGATGGCTGTACTTGTGGAGTGGCTTTCATTCACTAACATTGTGAAACTCAAACCTGGGACATCAAACGACGTCGTTGGGTCCCTTTTAAGGACAGGATTGTATGGTGTCCGTACTGGATTCTCGTACTTGGTTATGTTGGCTGTTATGTCGTTTAATGGTGGCGTGTTTCTCGCCGCAATTTTCGGCCATGTCATTGGGTTTATGATTTTTGGTACTATGGCTGTGATGAAGAAATCTGGTGGGTTGGATTCTTCCAAACCGCAGAgtgtgtttgtttga 462 0.4719 MSFTATANGVPSNSTVAMMLGRRRIPIHTSFYWGHKVDILFHCWPGNSVPMYAVALILVFVMAVLVEWLSFTNIVKLKPGTSNDVVGSLLRTGLYGVRTGFSYLVMLAVMSFNGGVFLAAIFGHVIGFMIFGTMAVMKKSGGLDSSKPQSVFV 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01260 153 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 8 139 IPR007274 GO:0005375|GO:0016021|GO:0035434
Tsu04g01260 153 Pfam Ctr copper transporter family 86 131 IPR007274 GO:0005375|GO:0016021|GO:0035434
Tsu04g01260 153 Pfam Ctr copper transporter family 30 72 IPR007274 GO:0005375|GO:0016021|GO:0035434
Tsu04g01260 153 PANTHER COPPER TRANSPORTER 4 8 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01260 Tsu-Chr4 12771276 12771737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01260 30 151 Inorganic Solute Cotransporters AT5G59030 45.902 8.34e-34 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01260 K14686 - gmx:100803410 246.128
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g01260 04 12771276 12771737 Tsu04g01260 04 12771276 12771737 ECH