Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01250 ATGGCATCAAATCAGAAAGAAGAGGTGAAGCTTTTTGGAATTGTGGGAAGTCCTTTTGTAGTAAGGGTGGAGATTGCTCTAAATTTGAAGGGAGTTCAATACAAATTTGTGGAAGAAAAGAAGGGAGAGTTTAGTGATACACTAATCAAATACAACCCTGTTTATAAGAAAGTTCCTGTATTAGTTCATAATGACAAACCCATATCTGAGTCACTTGTGATCCTTGAATATATTGATGAGACTTGGAAACAAAATCCAATCTTACCTTCTGATCCTCACAAAAGAGCATTGGCCCGTTTCTGGTCCAAGTTTATAGATGATAAGTGTTTGGATGCTGCAAGAAAAGTTGCATTTTCTCTTGATGAGAAAGAACGTGAGGAGGGTTTTAAGGAATTAGAACTGGCTTTTCAATTTCTCGAAGATGAGCTCAAGGACAAATTCTTTGGTGGAGAAGAGATTGGCATTGTCGACATTACAGGTGTCTTCATAGCTTTTTGGGTCCCTATTATACAAGAAGCAATAGGATTGAAGTTGCTCACTAGTGAGAAATTTCCAAAGCTTTACAAATGGAGTCAAGACTTCAACAATCACCAAGTTGTCAAGGAAAAATTACCTAATAGAGAAACACAATTGGCCTTCTTCAAAGCTCGTTATGAAAGTATTGTTGCTtcaaaagattaa 681 0.3642 MASNQKEEVKLFGIVGSPFVVRVEIALNLKGVQYKFVEEKKGEFSDTLIKYNPVYKKVPVLVHNDKPISESLVILEYIDETWKQNPILPSDPHKRALARFWSKFIDDKCLDAARKVAFSLDEKEREEGFKELELAFQFLEDELKDKFFGGEEIGIVDITGVFIAFWVPIIQEAIGLKLLTSEKFPKLYKWSQDFNNHQVVKEKLPNRETQLAFFKARYESIVASKD 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01250 226 SFLD Main.3: Omega- and Tau-like 5 224 IPR045073 -
Tsu04g01250 226 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 7 86 IPR004045 -
Tsu04g01250 226 SUPERFAMILY Thioredoxin-like 9 109 IPR036249 -
Tsu04g01250 226 CDD GST_N_Tau 9 82 - -
Tsu04g01250 226 Pfam Glutathione S-transferase, N-terminal domain 8 80 IPR004045 -
Tsu04g01250 226 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 213 IPR010987 -
Tsu04g01250 226 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 221 IPR045073 -
Tsu04g01250 226 Gene3D Glutaredoxin 2 90 - -
Tsu04g01250 226 Gene3D - 91 225 - -
Tsu04g01250 226 SFLD Main (cytGST) 5 224 - -
Tsu04g01250 226 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 5 221 - -
Tsu04g01250 226 Pfam Glutathione S-transferase, C-terminal domain 120 197 IPR004046 -
Tsu04g01250 226 CDD GST_C_Tau 92 217 IPR045074 GO:0004364|GO:0006749
Tsu04g01250 226 SUPERFAMILY GST C-terminal domain-like 80 219 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01250 Tsu-Chr4 12633719 12637182 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01250 4 224 Glutathione S-transferase Gene Family AT3G09270 50.446 2.64e-74 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01250 K00799 - gmx:100500680 307.76