Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01249 ATGACATCAATTCAGGAAGAAGAGGTGAAGCTTTTTGGCGTAGTGCCAAGTCCATTTGTAACTAGAGTTGACATAGCTCTAAATTTGAAGGGAGTTGAATACAAATTTGTGGAAGAAAACTTAGGAAATTTTAGTGATACACTAATCAAATACAACCCTGTTCATAAGAAAGTTCCTATATTAGTTCACAAAGGAAAACCCATTTCAGAATCTCTTGTGATTCTTGAGTATATTGATGAGACTTGGAAACAAAATCCAATCTTGCCTTCTGATCCATACCAAAGAGCCTTGGCTCGATTTTGGTCCAATTTCATAGATGATAAGTTTCTGGGTGCTCTACAGATATGGGCTTCTTCTCTTAGGGCGAAAGAAAGCAACCAAGAGAATATTGAGGAACTAGAAGTGGTTTTTCAATTTCTTGAGAATGAACTCAATGAAAAGTTCTTTGGTGGAGAAGAGATTGACATTGTTGATATTACAGGTGTCTACATAGCTTATTGGTTCCCTGTTATGCAAGAAATATCAGGATCGAAGGTGTTCACCAATGAGAAATTTCCCAAACTTTACAAATGGAGTCAAGATTTGACCAATCACCAAGTTGTTAAGGAAAAATTACCTAACAGAGAAACAGTGTTAGCCTATTTAACAGCTGGTTATGAAAGTCTTGTTGCTTCAAATTAG 681 0.3612 MTSIQEEEVKLFGVVPSPFVTRVDIALNLKGVEYKFVEENLGNFSDTLIKYNPVHKKVPILVHKGKPISESLVILEYIDETWKQNPILPSDPYQRALARFWSNFIDDKFLGALQIWASSLRAKESNQENIEELEVVFQFLENELNEKFFGGEEIDIVDITGVYIAYWFPVMQEISGSKVFTNEKFPKLYKWSQDLTNHQVVKEKLPNRETVLAYLTAGYESLVASN 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01249 226 SUPERFAMILY GST C-terminal domain-like 80 217 IPR036282 -
Tsu04g01249 226 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 5 221 - -
Tsu04g01249 226 CDD GST_N_Tau 9 82 - -
Tsu04g01249 226 SFLD Main.3: Omega- and Tau-like 5 221 IPR045073 -
Tsu04g01249 226 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 214 IPR010987 -
Tsu04g01249 226 Coils Coil 123 143 - -
Tsu04g01249 226 Gene3D - 91 226 - -
Tsu04g01249 226 Pfam Glutathione S-transferase, N-terminal domain 8 80 IPR004045 -
Tsu04g01249 226 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 221 IPR045073 -
Tsu04g01249 226 Gene3D Glutaredoxin 2 90 - -
Tsu04g01249 226 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 7 86 IPR004045 -
Tsu04g01249 226 Pfam Glutathione S-transferase, C-terminal domain 122 197 IPR004046 -
Tsu04g01249 226 SFLD Main (cytGST) 5 221 - -
Tsu04g01249 226 SUPERFAMILY Thioredoxin-like 9 109 IPR036249 -
Tsu04g01249 226 CDD GST_C_Tau 92 217 IPR045074 GO:0004364|GO:0006749
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01249 Tsu-Chr4 12620873 12623867 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01249 7 222 Glutathione S-transferase Gene Family AT2G29420 46.330 1.25e-68 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01249 K00799 - gmx:100527851 289.656