Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01247 ATGACATCAATTCAAGAAGAAGAGGTGAAGCTTTTTGGTGTAGTGCCAAGTCCATTTGTAACTAGAGTAGACATAGCTCTTAATTTGAAGGGAGTTCAATACAAATTTGTGGAAGAAAATTTAGGAAATTTTAGTGATACACTAATCAAATACAACCCTGTTCACAAGAAAGTTCCTGTATTAGTCCATAATGAGAAACCCATATCAGAATCTTGTGTAATTCTTGAGTACATTGATGAGACTTGGAAACAAAATCCAATCTTGCCTTCTGATCCTTACCAAAGAGCTTTGGCTCGTTTCTGGTCCAATTTCATAGATGATAAGTTTTTGAGTGCTGTACGGAAATGGAAAGTAAACAATGAAGAGAGTATTGAGGAAATGGAAGTGGCTTTTCAATTTCTTGAGAATGAACTCAATGACAAATTCTTTGGTGGAGAAGAGATTGGCATTGTTGACATTACTGCAGTTTTCATAGCTTATTGGTTCCCTATTATACAAGAAATAATAGGATTGAAGTTGTTTACCAATGAGAAATTTCCAAAGCTTTACAAATGGAGCCAAGACTTCACCAATCATCAAGCTGTCAAGGAAAAATTACCTAGCAGAGAAACATTGTTTGCATACTTCAGAGCTCGTTTGGAAACTCTTGTTGTTCCAAAATAG 663 0.3529 MTSIQEEEVKLFGVVPSPFVTRVDIALNLKGVQYKFVEENLGNFSDTLIKYNPVHKKVPVLVHNEKPISESCVILEYIDETWKQNPILPSDPYQRALARFWSNFIDDKFLSAVRKWKVNNEESIEEMEVAFQFLENELNDKFFGGEEIGIVDITAVFIAYWFPIIQEIIGLKLFTNEKFPKLYKWSQDFTNHQAVKEKLPSRETLFAYFRARLETLVVPK 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01247 220 SUPERFAMILY GST C-terminal domain-like 80 215 IPR036282 -
Tsu04g01247 220 SUPERFAMILY Thioredoxin-like 9 109 IPR036249 -
Tsu04g01247 220 CDD GST_N_Tau 9 82 - -
Tsu04g01247 220 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 214 IPR045073 -
Tsu04g01247 220 Gene3D Glutaredoxin 2 90 - -
Tsu04g01247 220 SFLD Glutathione Transferase (cytosolic) 5 216 IPR040079 -
Tsu04g01247 220 SFLD Main.3: Omega- and Tau-like 5 216 IPR045073 -
Tsu04g01247 220 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 5 214 - -
Tsu04g01247 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 209 IPR010987 -
Tsu04g01247 220 Pfam Glutathione S-transferase, N-terminal domain 8 80 IPR004045 -
Tsu04g01247 220 Gene3D - 91 220 - -
Tsu04g01247 220 CDD GST_C_Tau 92 212 IPR045074 GO:0004364|GO:0006749
Tsu04g01247 220 Pfam Glutathione S-transferase, C-terminal domain 103 191 IPR004046 -
Tsu04g01247 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 7 86 IPR004045 -
Tsu04g01247 220 Coils Coil 117 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01247 Tsu-Chr4 12612523 12613773 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01247 5 211 Glutathione S-transferase Gene Family AT3G09270 51.402 5.64e-72 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01247 K00799 - gmx:100527851 305.834