Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01246 ATGGCATCAAATCAGGAAGAGATTAAGCTTTTTGGAATGTTGGCAAGTCCATTTGTGAGCAGAGTAGAGATTGCTCTAAAATTGAAGGGAATTGAATACaaatatgaagaagaaaagtggGGGAACTTGAGTGAAACACTCTTCAAATACAATCCTGTTTACAAGAAAGTTCCTGTATTAGTTCATAATGATAAGCCCATATCAGAATCACTTGTGATTCTTGAATATATTGATGAGACTTGGAAACAAAATCCAATCTTACCTTCTGATGCTCACAAAAGAGCCTTGGCTCGTTTTTGGTCCAATTTTATAGACGACAAGTGTTTGAGTGTTGTACGAAAAGTTGTTTTTGCTATTGATGAGAAAGAACGTGAGAAGAGTATTGAGGAAATGGAAGTGGCTCTTCAAATTCTTGAGAATGAGCTCAAGGACAAATTCTTTGGTGGACAAGAGATTGGCATTGTTGACATTACTGCAGCCTTCATAGCTTTACATGAAGTAATGGGATTGAATTTGTTCACTAGTGAAAATTTTCCCAAACTTTACAAATGGAGTCAAGACTTCAACAACCACCCAATTGTCAAACAAAAATTGCCTCCTAAAGAAACTCTTTTGGCCTTCTACAAAGCTCGTTTAGAAAATCTTGTTACTTCAAAatag 660 0.3485 MASNQEEIKLFGMLASPFVSRVEIALKLKGIEYKYEEEKWGNLSETLFKYNPVYKKVPVLVHNDKPISESLVILEYIDETWKQNPILPSDAHKRALARFWSNFIDDKCLSVVRKVVFAIDEKEREKSIEEMEVALQILENELKDKFFGGQEIGIVDITAAFIALHEVMGLNLFTSENFPKLYKWSQDFNNHPIVKQKLPPKETLLAFYKARLENLVTSK 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01246 219 CDD GST_N_Tau 8 81 - -
Tsu04g01246 219 Pfam Glutathione S-transferase, C-terminal domain 108 192 IPR004046 -
Tsu04g01246 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 213 IPR045073 -
Tsu04g01246 219 Gene3D Glutaredoxin 1 89 - -
Tsu04g01246 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Tsu04g01246 219 SUPERFAMILY Thioredoxin-like 7 108 IPR036249 -
Tsu04g01246 219 SFLD Main.3: Omega- and Tau-like 4 216 IPR045073 -
Tsu04g01246 219 CDD GST_C_Tau 91 211 IPR045074 GO:0004364|GO:0006749
Tsu04g01246 219 Gene3D - 90 219 - -
Tsu04g01246 219 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 1 213 - -
Tsu04g01246 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 212 IPR010987 -
Tsu04g01246 219 SUPERFAMILY GST C-terminal domain-like 79 214 IPR036282 -
Tsu04g01246 219 SFLD Main (cytGST) 4 216 - -
Tsu04g01246 219 Coils Coil 121 141 - -
Tsu04g01246 219 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01246 Tsu-Chr4 12592260 12609762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01246 4 218 Glutathione S-transferase Gene Family AT3G09270 50.000 2.05e-70 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01246 K00799 - gmx:547578 290.812