Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01182 ATGCAAACCTATCTTCAATTCTTGGCATCAGTTTTGGTGTTCCTTTTTGTCCCAGTTTTATCCCAACTTGACCAGTTCATGTATGCAGGATTCAAGGATGTTGGTCACAACAATCTAACCTTAGATGGAACTGCAGTGATAGAGAAAAATGGAATAATAAGATTAACAAATGATACAAACAGAATCATGGGTCATGCTTTTTACTCTTTACCTTTTCAACTAAAGAACTCAACAACTGGTAAagctttttcattttcttcatcttttgcTTTAGCTGTTGTTTCTGAGTTTCCTAAGTTTGGTGGTCATGGCATGGCTTTCACAATAGCACCTTCTAAGCATCTCAAAGGTTTACCTATTCAATATCTTGGTCTTCTCAATTCAAGTAGTGTTGGTAATTTCTCTAACCATCTTTTTGCTGTTGAGTTTGACACTGCCAAAGACATAGATTTTGGTGATATCAATGATAACCATGTTGGAATAGACATCAATACTTTGAAGTCAAATGTATCTGTTACTGCTGGTTATTACATTAATGATTCAACCAAACAAGATATTAATATCAAAAGTGGAAAACCAATTCTTGTTTGGGTTGATTATGATTCTTCAGTGAATCTTGTTAGTGTTACACTTTCTCTAACTTCAATTAAACCCAAAAAACCAATCTTGTCCTTAAATATGGATCTATCACCTATTTTTCTTGATACTATGTATGTTGGATTCTCTGCATCGACCGGTATGCTTGCTAGCTCTCATTACTTATTGGGTTGGAGCTTTAAAATCAACGGTCCAGCATCACGTCTTGATTTGTCTTCACTACCGCAACCTCCGCAACCAAAGAAGAAGCACTCGTCTTTAATATTATTGATAACTGGTATTTCACTTACAGCTTTGGTTATTGCACTGTGTTTTGTTGCATTTGGTATTTACCTTTTCAGAAAAATCAAGAATGCTGATGTAATAGAAGCATGGGAGCTTGAAATTGGACCACATAGATACTCCTATCAAGAACTCAAGAAAGCTACAAAAGAATTTAAGGAGAAAGAGTTACTTGGACAAGGTGGTTTCGGAAGAGTTTACAAAGGGACGTTGCCGAAATCAAAGATCCAAGTAGCTGTTAAGAGAGTTTCACATGAATCAAAACAAGGGCTGAGGGAATTTGTGTCTGAAATCTCAAGCTTAGGACGACTTTGCCACCGGAATTTGGTTCAGTTACTCGGTTGGTGCCGCTGCAGAGGCGACCTCTTACTCGTGTATGATTTCATGGCTAATGGAAGCTTAGACAAGTACTTGTTTGATGATACAGAAATTGTGCTAAGTTGGGAACAAAGGTTTAAGATAATAAAGGATGTTGCTTCGGGTCTTTCGTTTCTACATGAAGGCTATGAACAAGTGGTAATACACAGAGATGTTAAGGCTAGTAATGTTCTGTTGGATTCTGAACTAAATGGAAGATTAGGTGATTTTGGTTTGGCAAGGTTGTATGAACGTGGTGCTAATCCCGGCACAACAAGAGTGGTGGGAACATTAGGCTATTTGGCGCCGGAGTTGCCTAGAACAGGAAAGGCATCTACAAGCTCCGACGTTTTTGCATTTGGCGCACTTCTACTCGAGGTTGCTTGCGGAAGAAGGCCTATTGAGCCAAATGCATTACAAGAAGAGTTGGTGTTGGTTGAATGGGTGTGGGAAAAGTATAAACAAGGAAGGTTACTTGAAGTAGTGGATCCTAAATTAAATGGTTGTTTTGATGAATGTGAGGTTATTATGGTGTTGAAATTGGGGATGATTTGTTCTAATGATGTGCCTACTATAAGGCCTTGCATGAGACAAGTAGTGAGGATTTTGGATGGAGAAGTTGAGTTGCCTAATGAATTGAGAAAGCCAGGAATTATTGATTCACAAGAGGGGTTTGATGAATTCTTGCATTCATTTGGAACTTCTAATTCATTTGATAAGACTAGTTCAAGCTCCTATCTTGCAAATAAAGATGTGAATACTAATACTAGTTCAATCTCTTTTGCTAATTCACCTTAA 2034 0.3736 MQTYLQFLASVLVFLFVPVLSQLDQFMYAGFKDVGHNNLTLDGTAVIEKNGIIRLTNDTNRIMGHAFYSLPFQLKNSTTGKAFSFSSSFALAVVSEFPKFGGHGMAFTIAPSKHLKGLPIQYLGLLNSSSVGNFSNHLFAVEFDTAKDIDFGDINDNHVGIDINTLKSNVSVTAGYYINDSTKQDINIKSGKPILVWVDYDSSVNLVSVTLSLTSIKPKKPILSLNMDLSPIFLDTMYVGFSASTGMLASSHYLLGWSFKINGPASRLDLSSLPQPPQPKKKHSSLILLITGISLTALVIALCFVAFGIYLFRKIKNADVIEAWELEIGPHRYSYQELKKATKEFKEKELLGQGGFGRVYKGTLPKSKIQVAVKRVSHESKQGLREFVSEISSLGRLCHRNLVQLLGWCRCRGDLLLVYDFMANGSLDKYLFDDTEIVLSWEQRFKIIKDVASGLSFLHEGYEQVVIHRDVKASNVLLDSELNGRLGDFGLARLYERGANPGTTRVVGTLGYLAPELPRTGKASTSSDVFAFGALLLEVACGRRPIEPNALQEELVLVEWVWEKYKQGRLLEVVDPKLNGCFDECEVIMVLKLGMICSNDVPTIRPCMRQVVRILDGEVELPNELRKPGIIDSQEGFDEFLHSFGTSNSFDKTSSSSYLANKDVNTNTSSISFANSP 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01182 677 Pfam Legume lectin domain 25 273 IPR001220 GO:0030246
Tsu04g01182 677 ProSiteProfiles Protein kinase domain profile. 345 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g01182 677 Pfam Protein tyrosine and serine/threonine kinase 347 613 IPR001245 GO:0004672|GO:0006468
Tsu04g01182 677 Gene3D Transferase(Phosphotransferase) domain 1 422 631 - -
Tsu04g01182 677 Gene3D - 24 263 - -
Tsu04g01182 677 PANTHER - 6 670 - -
Tsu04g01182 677 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 282 IPR013320 -
Tsu04g01182 677 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Tsu04g01182 677 Gene3D Phosphorylase Kinase; domain 1 330 421 - -
Tsu04g01182 677 SMART serkin_6 345 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g01182 677 ProSitePatterns Protein kinases ATP-binding region signature. 351 374 IPR017441 GO:0005524
Tsu04g01182 677 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 6 670 - -
Tsu04g01182 677 SUPERFAMILY Protein kinase-like (PK-like) 327 631 IPR011009 -
Tsu04g01182 677 CDD STKc_IRAK 351 617 - -
Tsu04g01182 677 CDD lectin_legume_LecRK_Arcelin_ConA 25 263 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01182 Tsu-Chr4 11752445 11754650 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01182 19 674 Receptor kinase-like Gene Family AT3G55550 57.251 0.0 748
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tsu04g01182 PK_Tyr_Ser-Thr 1.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01182 - - gmx:100784346 961.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g01182 04 11752445 11754650 Tsu03g01717 03 17534564 17536564 ECH
Tsu04g01182 04 11752445 11754650 Tsu04g01182 04 11752445 11754650 ECH