Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01178 ATGACAATTTCAAATTCTACTACGTTAAAATTTTCAATACTCCTAATTATACTACTTGCATTTGAATCTAGTGCGGGTGAGGTAGTGGTGACGATTTTCAATAGACTAATGGTACCAGGTCCCTCGAATATCACTCTCCATTGCAAATCTCAAGATGATGATCTTGGATTTCACACACTACAATATACAGGCGTTTATGAGTTTAAATTCACTCCAAATTTCTTTCGTTCTACCTTATTCTTTTGCAGCTTTACATGGCCTAGAAACCCCCATCGTCATTATCTTGACATTTACGATGCTCAGCATGACAACTGCCATAAATGCATTTGGAATATAAACAAGGATGGAGGTTGTCTGAACGACCATAAATGTGGCCCTTGGAAAAGTATCGAATTAATGGAT 402 0.3706 MTISNSTTLKFSILLIILLAFESSAGEVVVTIFNRLMVPGPSNITLHCKSQDDDLGFHTLQYTGVYEFKFTPNFFRSTLFFCSFTWPRNPHRHYLDIYDAQHDNCHKCIWNINKDGGCLNDHKCGPWKSIELMD 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01178 134 Pfam Plant self-incompatibility protein S1 30 127 IPR010264 -
Tsu04g01178 134 PANTHER - 25 127 IPR010264 -
Tsu04g01178 134 PANTHER S-PROTEIN HOMOLOG 18-RELATED 25 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01178 Tsu-Chr4 11669479 11669880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01178 1 132 Carbohydrate Esterase AT3G16970 34.722 1.51e-18 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01178 - - mtr:MTR_7g055907 143.28