Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01173 ATGGGAAACAGTAGCAACCATGTTTTTGGTGTTGAATTTGATACTTTGAAAAGTCTAGAGTTTGCTGATATTGATAATAACCATGTTGGTATTGATATCAATGATCTGAAATCAGCTAATTCAACTACTGCAGGATATtatgataattataataatgagTGGTTTATCCGAGATATTTCCCTTTCAAGTGGAGATCCTATACAGGTATGGATTGAATATGATGGAGTTAAGAAAAAGATTGATGTTACTTTAGCTCCAATTAATGTTGTTAAACCAACACGACCTTTGTTATCATTGACCAAAGATCTTTCTCCAATTCTTAACAATATTATGTATGTTGGATTTTCATCAGCTACTGGTTCTATTCGTACTTATCATGATGTTCTTGGTTGGAGTTTTAAGGTTGATGGTAAAGTTCACGACCTTATAATCTCTAAACTTCCAACACTAACAAGATTTTCCGAGAAAAAAGAGTCAAAATTTTTAACTGTTGGGTTGCCTTTGATTTTGCTAAGTATGGTTTTCGTGATAACTTTAGGTGTTATGTATTATATCAAAAGGAAGAAGTTTGCTGAGATACTTGAAGATTGGGAACATGAATATGGACCACATAGGTTTAAGTTCAAAGATCTATACTCTGCCACCAAGGGTTTCAAGGAAAAGGGGCTATTGGGAGTTGGTGGATTTGGTAGAGTCTACAAAGGTGTGATACCAAGTTCCAAACTTGAGATTGCTGTGAAAAGGGTGTCTCATGAATCAAGACAAGGGATGAGGGAATTTGTAGCGGAGATTGTTAGTATCGGTCGTCTTCGTCACAGGAATCTTGTTCCACTTCTCGGCTATTGCAGACGAAAAGACGAGTTACTTTTGGTTTATGAGTACATGCCTAATGGAAGTTTAGACAATTATCTATACAAACAACCAAAAGTGAGCTTGAATTGGTGTCAAAGATTTCGAATCATCAAAAGGGTTGTTTCGGGTTTGTTTTATCTACATGAAGAATGGGAGCAAGTTGTGATTCACAGAGACATAAAAGCTAGCAATGTGATGTTAGATGCTGAATTGAATGCTAGATTGGGAGATTTTGGACTTTCGAGATTGCATGATCACGGTGCTGATCCGCATACAACTCATGTAGCTGGAACTGTAGGTTATCTTGCTCCTGAGCATACTAGAACAGGTAAAGCGACTAAATTTTCTGATGTGTATGCTTTTGGTGCATTTCTTCTTGAGGTTGTTTGTGGTAGGAGACCTATAGATCGTGTTGGAAAATATGAAAGTGTTATTCTAGTTGATTGTGTGTTTCAATGTTGGGAAAGAGGTGAGATTCTTGAGGCAAAGGATGAAAACTTTGGATCAGATTATGTGTCTGATGAGGTTGAATTGGTATTGAAACTTGGCTTGTTGTGTTCACATTCAGAACCTTTGGCTAGACCAAGTATGAGGCAAGTTATGCAGTATTTGGAGAGGGATATACCTTTGCCTGATTTGTCTTTGCTTAGTTTATCTTCTTTTGGATTAACTTTTGGGTACCAAGAAGTTGTCAAGGACAAGACAATGTCACATATTTCTGTGTCTGTTACTGAATCTCTTCTCTCTGGTGGTCGATGA 1611 0.3675 MGNSSNHVFGVEFDTLKSLEFADIDNNHVGIDINDLKSANSTTAGYYDNYNNEWFIRDISLSSGDPIQVWIEYDGVKKKIDVTLAPINVVKPTRPLLSLTKDLSPILNNIMYVGFSSATGSIRTYHDVLGWSFKVDGKVHDLIISKLPTLTRFSEKKESKFLTVGLPLILLSMVFVITLGVMYYIKRKKFAEILEDWEHEYGPHRFKFKDLYSATKGFKEKGLLGVGGFGRVYKGVIPSSKLEIAVKRVSHESRQGMREFVAEIVSIGRLRHRNLVPLLGYCRRKDELLLVYEYMPNGSLDNYLYKQPKVSLNWCQRFRIIKRVVSGLFYLHEEWEQVVIHRDIKASNVMLDAELNARLGDFGLSRLHDHGADPHTTHVAGTVGYLAPEHTRTGKATKFSDVYAFGAFLLEVVCGRRPIDRVGKYESVILVDCVFQCWERGEILEAKDENFGSDYVSDEVELVLKLGLLCSHSEPLARPSMRQVMQYLERDIPLPDLSLLSLSSFGLTFGYQEVVKDKTMSHISVSVTESLLSGGR 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01173 536 Pfam Protein kinase domain 218 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g01173 536 CDD STKc_IRAK 224 490 - -
Tsu04g01173 536 SUPERFAMILY Concanavalin A-like lectins/glucanases 6 240 IPR013320 -
Tsu04g01173 536 SMART serkin_6 218 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g01173 536 CDD lectin_legume_LecRK_Arcelin_ConA 2 137 IPR001220 GO:0030246
Tsu04g01173 536 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IV.1-LIKE 2 513 - -
Tsu04g01173 536 ProSitePatterns Serine/Threonine protein kinases active-site signature. 339 351 IPR008271 GO:0004672|GO:0006468
Tsu04g01173 536 Gene3D Phosphorylase Kinase; domain 1 203 294 - -
Tsu04g01173 536 SUPERFAMILY Protein kinase-like (PK-like) 199 498 IPR011009 -
Tsu04g01173 536 Gene3D - 5 162 - -
Tsu04g01173 536 PANTHER - 2 513 - -
Tsu04g01173 536 ProSitePatterns Protein kinases ATP-binding region signature. 224 247 IPR017441 GO:0005524
Tsu04g01173 536 Pfam Legume lectin domain 3 145 IPR001220 GO:0030246
Tsu04g01173 536 ProSiteProfiles Protein kinase domain profile. 218 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g01173 536 Gene3D Transferase(Phosphotransferase) domain 1 295 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01173 Tsu-Chr4 11646992 11648711 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01173 2 536 Receptor kinase-like Gene Family AT2G37710 62.271 0.0 672
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tsu04g01173 Pkinase 5.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01173 - - adu:107484540 771.926