Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01158 ATGATTGAGTCATCCATGTCAAAGACAATGATGGAGAAAATAATGACTTCTAATTGGTCAGAAGGGTCAGAACATCATGAACTTTTAAGAGACCTTttagttgatgaatcttctctACTTAGTATTTTGCCACAAGGGATAGTAAATGAAGTAACCAACACAAGCCATGATGATTTTTCACAAGACCAAGTCTTTAATAGGttcatttcaaatatttattcaGGTCCTACCATTTCAGATATTGAAAATGCTTTGTTAGTTACTAACCATAGTAACCACTTTCAACCAATTTCATCAACAAGAGTTTCGATATTGGAAAAGAGTTTGAGTAAGATTGAGAATAAGTATACTTTGAAAATCAAATGCTTTGGCAATGGAATGGGTGATGATGGATATAGGTGGAGGAAGTATGGTcaaaaatccattaaaaataGCCCAAATCCTAGGAGTTACTATAGGTGCACCAACCCAAGGTGTGGTGCTAAGAAACAAGTTGAGAGATCCATTGAAGACCCTGACACTCTTATAATCACTTATGAAGGACTCCACTTGCATTTCACTTATCCATATTTCTTAGTGGGCCAGTCACATCAATCTAATTCCCACCCACCAATCAAGAAGTCCAAGCCCACTTCTTCACAAGGCCCAACCCAAGTCCATAAAGGAAATGATGTTCATGAAGACCAGATTATTCAAGAAGCCCATGAAGCCCAAACTAGTGCTTCTTTGGAACTCATATTACCGAATTTATTGGACTCTACACAAGATAAGGCCCAAAAAAATTTGGGCTCGCAAGGATTGCTCGAAGACATGGTGCCATTCATGGTTAGGAACCCCACAAACAATGTTGATAGTGATTGA 861 0.3635 MIESSMSKTMMEKIMTSNWSEGSEHHELLRDLLVDESSLLSILPQGIVNEVTNTSHDDFSQDQVFNRFISNIYSGPTISDIENALLVTNHSNHFQPISSTRVSILEKSLSKIENKYTLKIKCFGNGMGDDGYRWRKYGQKSIKNSPNPRSYYRCTNPRCGAKKQVERSIEDPDTLIITYEGLHLHFTYPYFLVGQSHQSNSHPPIKKSKPTSSQGPTQVHKGNDVHEDQIIQEAHEAQTSASLELILPNLLDSTQDKAQKNLGSQGLLEDMVPFMVRNPTNNVDSD 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01158 286 SMART WRKY_cls 128 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu04g01158 286 PANTHER WRKY TRANSCRIPTION FACTOR 49-RELATED 19 282 - -
Tsu04g01158 286 Gene3D WRKY domain 124 181 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu04g01158 286 SUPERFAMILY WRKY DNA-binding domain 126 185 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu04g01158 286 Pfam WRKY DNA -binding domain 129 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu04g01158 286 MobiDBLite consensus disorder prediction 197 220 - -
Tsu04g01158 286 MobiDBLite consensus disorder prediction 197 221 - -
Tsu04g01158 286 ProSiteProfiles WRKY domain profile. 123 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu04g01158 286 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 19 282 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01158 Tsu-Chr4 11492195 11495266 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01158 60 280 WRKY Transcription Factor Family AT5G43290 46.218 7.84e-55 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tsu04g01158 WRKY 2.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01158 - - gmx:100810459 387.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g01158 04 11492195 11495266 Tsu04g01158 04 11492195 11495266 ECH