Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01154 ATGATGGATCCACATCTTAAAGGGTTTTGTGGTTCCACAAATGAGATCCAGTTTAGGAATCAATCTTTGTCCGTTCTTCAGAATCAGagacttgaaaatggtttttttgaTCAAAGTAGAGAATTTGGTTCAAATTTGATACCAGTTGATACACCTTCTTCGACAACAACCTCGATTTCGACGCATGAGGAACCTTCTCCTGAGGACTGTGAATTTTCTGATTCTGTTTTGAGTTACATCAATAATATCCTTATGGAAGAAGATATGGAGGATAAAACTTGTATGCTTCAAGATTCTTTAGATCTTCAAATTGCTGAGAAATCGTTCTATGAAGTGATAGGCGAAAAGTATCCGGTTTCTCCGTTAAGAGAAACTCCAAGTCTTGGTAATCAAATTGATGGTGTTGGAGATAATAGCTTCTTTGATAGTTATGGTActtttgttgatgatggtgatcTTAGTAGCATTTTTATGAACAATTCTTCGCGCGGAAACTTGAGGGAAGTTCAATTTCCTCATCAAGATTTTCCTGTAAATAGCATTTTGCAATCGTCTTATAGCTCTACAAATAGTGTAAAAAGTACTGTTGAAGGTCCTCTGGACTCTCCTGATAGTATTCTACAGGTATCAGATCAGAATTGTGAGAATCAACCGATTTTGCAATTTCAAAAGGGTGTTGAGGAGGCTAATAAGTTTCTCCCTAGTGAAAATGGATTCTTTCATAATTTTGATGTTGCCAAGTTTTCGATACTAGACCCTAAATTGGTTAAGGCGGAGAAGGATGAAAGGGactcttttctttttggatCCAAGGTAAGGAAGCATCCTCACGGCGAAGAGGTGGATGTCGAAGAAAATAGAAGCAGCAAGCAAGCGGCGATTTACTCAGAACCTATGTTGAGGTCAACTATGGCTGATACGATCCTGCTTCATAGTTTAGGTGATGGTAAGACGCATTTTACGGCTCGTCGCGAAGCTTTGCAAATTAAGAACAATATGATAATGCTTCCAAGTAATAAATCAAAAGCTCGTACTAGTGGTAAAGGACGAGGTAAAAAACAAAACGGGAAAAAGGAAGTGATTGATTTGAGAACACTACTTATTCTTTGTGCACAAGCTGTTGCAGCAGACGACCATAAAAGTGCACACGAGTTGCTAAAGCAGATCAGGCAGCATTCAAATATTTTCGGAGATGGAAATCAGCGGTTGGCTCATATTTTTGCTGATGGCCTTGAGGCGCGTTTGGCTGGTACAGGAAGCCAAATTTATAAAGGACTAATCAGTAAAAGAACCTCAGCTGCCGATTTTCTGAAAGCTTACTATCTATACCTTGCTGCTTGCCCTTTTAGGAAGATGACTAGTTTTGTCTCGAATGTCACTATAATGCATTCTGTCGCAAGTTCAATGAGGGTCCATGTCGTAGATTTTGGTATCCTGTATGGTTTCCAATGGCCTACCCTAATACAAAGACTTTCATTAAGACCTGGAGGACCGCCGAAACTTCGGATTACAGGAATAGACTTTCCACAACCTGGTTTTAGGCCTGCAGAGAGAATCATAGAAACCGGTTCGCGCTTGGCAGCGTATGCTGAATCATTTAATGTGCCATTCGAGTATAATGCCATAGCGAAAAAATGGGAAACCATTCAGCTTGAGGAACTCAAGATCGAAAAAGATGAATACCTTATTGTTACCTGTTTTTATCGTGGTAAAAACTTGTTGGATGAATCTGTTGTTGTAGACAGTCCAAGGAATAAAGTCCTCAATTTGATAAGGAGGATCAAACctgatatattcattcattgCATTATTAATGGAGCCTTTAATGCACCTTTCTTTGTTACTCGATTTAGggaggcattgtttcacttctcGTCGCTTTTTGATATGCTTGATAGTATTGTGCCTCGTGAGGACTGGGAAAGGATGCTAATTGAGAAAGAGATATTTGGGAAGGAAGCATTGAACGTTATAGCTTGTGAAGGTTGCGAGAGAGTAGAGAGGCCAGAAACATATAGGCAGTGGCAAGTTCGTATTCTCCGAGCCGGGTTTGTGCAACAGACATTTGGCAAGAACACGGTGGAAAGGGCAGTGGAGAAAGTAAAGTCTAGTTACCACAAGGATTTTGTAATTGACGAAGATGGCAAGTGGTTATTGAATGGTTGGAAAGGGCGAATTGTTTATGCGCTCTCTTGTTGGAAACCTGCTTGA 2211 0.384 MMDPHLKGFCGSTNEIQFRNQSLSVLQNQRLENGFFDQSREFGSNLIPVDTPSSTTTSISTHEEPSPEDCEFSDSVLSYINNILMEEDMEDKTCMLQDSLDLQIAEKSFYEVIGEKYPVSPLRETPSLGNQIDGVGDNSFFDSYGTFVDDGDLSSIFMNNSSRGNLREVQFPHQDFPVNSILQSSYSSTNSVKSTVEGPLDSPDSILQVSDQNCENQPILQFQKGVEEANKFLPSENGFFHNFDVAKFSILDPKLVKAEKDERDSFLFGSKVRKHPHGEEVDVEENRSSKQAAIYSEPMLRSTMADTILLHSLGDGKTHFTARREALQIKNNMIMLPSNKSKARTSGKGRGKKQNGKKEVIDLRTLLILCAQAVAADDHKSAHELLKQIRQHSNIFGDGNQRLAHIFADGLEARLAGTGSQIYKGLISKRTSAADFLKAYYLYLAACPFRKMTSFVSNVTIMHSVASSMRVHVVDFGILYGFQWPTLIQRLSLRPGGPPKLRITGIDFPQPGFRPAERIIETGSRLAAYAESFNVPFEYNAIAKKWETIQLEELKIEKDEYLIVTCFYRGKNLLDESVVVDSPRNKVLNLIRRIKPDIFIHCIINGAFNAPFFVTRFREALFHFSSLFDMLDSIVPREDWERMLIEKEIFGKEALNVIACEGCERVERPETYRQWQVRILRAGFVQQTFGKNTVERAVEKVKSSYHKDFVIDEDGKWLLNGWKGRIVYALSCWKPA 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01154 736 ProSiteProfiles GRAS family profile. 354 734 IPR005202 -
Tsu04g01154 736 MobiDBLite consensus disorder prediction 46 63 - -
Tsu04g01154 736 MobiDBLite consensus disorder prediction 46 71 - -
Tsu04g01154 736 Pfam GRAS domain family 363 734 IPR005202 -
Tsu04g01154 736 PANTHER SCARECROW-LIKE PROTEIN 9 44 735 - -
Tsu04g01154 736 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 44 735 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01154 Tsu-Chr4 11441978 11444977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01154 68 735 GRAS Transcription Factor Family AT2G37650 52.339 0.0 659
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tsu04g01154 GRAS 3.8e-111 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01154 - - gmx:100801824 1083.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g01154 04 11441978 11444977 Tsu04g01154 04 11441978 11444977 ECH