Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01145 atggGTGCTTGCTGGAGTAATAGGGTTAAGTCTGTGAGTCCTTCAAACACAGGGTTCACTTCTAGAAGTGTAAGCAGAAGTGGTCATGACATCAGCTCAACTAGCAGGAACTCATCAGCCTCCATATCGGTCACTTCTCGAAGTGAGGGTGAAATTTTGCAATCTTCCAACTTGAAAAGCTTCAGCTACAATGAGTTAAGAGCTGCAACGAGAAATTTCCGGCCGGATAGTGTCTTGGGGGAGGGTGGTTTTGGTTCAGTTTTTAAGGGCTGGATTGATGAGCATTCTCATGCTGCAACCAAACCTGGAATGGGTATTATTGTTGCTGTGAAGAGGCTTAATCAAGAGGGGTTTCAGGGTCACAGAGAATGGTTGGCTGAAATCAACTATCTCGGGCAATTTCAGCACCGTAATCTCGTCAAATTAATAGGATACTGCTGTGAGGATGAACACCGGCTTCTGGTTTATGAGTTTATGCCCAAGGGAAGCATGGAGAATCATCTTTTTAGACGAGGTTCTTATTTTCAGCCATTCTCTTGGAGTTTGCGAATGAAAATAGCCCTTGGTGCTGCCAAAGGTCTTGCTTTTCTCCATAGTACAGAACCTAAAGTCATATACCGTGACTTCAAAACATCGAATATACTACTTGATTCTAACTATGATGCCAAACTTTCTGATTTTGGGTTGGCAAGAGATGGACCAACTGGTGATAAAAGTCATGTCTCTACACGGGTCATGGGAACCCGTGGATATGCAGCGCCAGAGTATCTAGCAACAGGCCATCTTACTGCAAAGAGTGATGTATATAGTTTTGGAGTAGTTCTTCTGGAAATGATATCAGGAAGACGAGCCATAGACAAGAACCTACCAGCTGGAGAACACAACCTAGTCGAATGGGCCAAGCCTTACCTATCCAACAAACGAAGAGTTTTCCGCGTGATGGATCCGCGACTTGAAGGTCAATATTCACATACCCGAGCTCACGCTGCAGCCGCCCTTGCTTCACAATGTCTTTCGGTAGAGCCTAGGGTCAGGCCAACTATGGATGAGGTTGTGAAAACATTGGAGCAGCTTCAAGAACCAAAGGAAACACAAAAGAAAGGTTCTGATCACCGTCTTCGCAATTCCGGCCTCGGCCACCATGCATCCGGCAAAGGTAATGCAGATGCTACTAAAAAGGCTTCCGCTTATCCTAGACCTTCTGCTTCTCTCCTTAATGTTTGA 1224 0.451 MGACWSNRVKSVSPSNTGFTSRSVSRSGHDISSTSRNSSASISVTSRSEGEILQSSNLKSFSYNELRAATRNFRPDSVLGEGGFGSVFKGWIDEHSHAATKPGMGIIVAVKRLNQEGFQGHREWLAEINYLGQFQHRNLVKLIGYCCEDEHRLLVYEFMPKGSMENHLFRRGSYFQPFSWSLRMKIALGAAKGLAFLHSTEPKVIYRDFKTSNILLDSNYDAKLSDFGLARDGPTGDKSHVSTRVMGTRGYAAPEYLATGHLTAKSDVYSFGVVLLEMISGRRAIDKNLPAGEHNLVEWAKPYLSNKRRVFRVMDPRLEGQYSHTRAHAAAALASQCLSVEPRVRPTMDEVVKTLEQLQEPKETQKKGSDHRLRNSGLGHHASGKGNADATKKASAYPRPSASLLNV 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01145 407 MobiDBLite consensus disorder prediction 8 46 - -
Tsu04g01145 407 Gene3D Transferase(Phosphotransferase) domain 1 159 379 - -
Tsu04g01145 407 Pfam Protein kinase domain 76 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g01145 407 ProSiteProfiles Protein kinase domain profile. 73 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g01145 407 SUPERFAMILY Protein kinase-like (PK-like) 40 355 IPR011009 -
Tsu04g01145 407 MobiDBLite consensus disorder prediction 1 46 - -
Tsu04g01145 407 Gene3D Phosphorylase Kinase; domain 1 48 158 - -
Tsu04g01145 407 MobiDBLite consensus disorder prediction 358 377 - -
Tsu04g01145 407 ProSitePatterns Protein kinases ATP-binding region signature. 79 111 IPR017441 GO:0005524
Tsu04g01145 407 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Tsu04g01145 407 PANTHER OS01G0588500 PROTEIN-RELATED 22 392 - -
Tsu04g01145 407 CDD STKc_IRAK 79 358 - -
Tsu04g01145 407 MobiDBLite consensus disorder prediction 358 407 - -
Tsu04g01145 407 PANTHER KINASE 1B 22 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01145 Tsu-Chr4 11346994 11351276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01145 27 355 Glycoside Hydrolase AT3G07070 47.748 2.08e-107 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tsu04g01145 Pkinase 2.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01145 - - gmx:100793817 696.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g01145 04 11346994 11351276 Tsu04g01145 04 11346994 11351276 ECH