Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01133 ATGCCTCTTTCTCATATATCCAACAACTTTCGTCTTCGCAATCTTTTCATCTTATTCAGAAAACAGTTTACATTCGTCGCATTATCTTTATTCCTTCTCTTCTCTTTCGCTTTTTTCACCCGATCCAATCCCCACTCTCATGATGATAACTCTCACTCCAATTCCATCCTCATTCCTTTCACCCCTCTCACCAATTTCAAACAAATTGGCGCATTTTGCTTGGATGGCAGTTCTCCTGGTTACCATTTCCAAAAGGGTTTTGGATCCGGATCTCACAATTGGTTGCTCCACGTTgagGGAGGAGGGTGGTGCAATTCAATAGCTTCATGTTCTTATAGAAAAATGACTGCTTTGGGATCATCAATGTATATGGATGCATCGGTTCCTTTTTCGGGGATACTAAGTTCGGTTCCTTCTCAAAATCCTGATTTCTTTAACTGGAACAAGGTGAAGATACGCTATTGTGATGGTGCATCCTTTGCTGGTCACCCAGAAAGTGAGCAAAAAGGAAGTGGGTTGTTCTTCAGAGGCCAGATCATATGGGAATCTATTATGAACGAACTATTATCAATTGGAATGTCTAAAGCAGAACAGGCTCTGTTGTCAGGATGCTCTGCTGGAGGATTGGCAACTCTTATACATTGTGATAACTTTCGACAATTACTTCCGAAGGAGGCTGCTGTCAAGTGTCTCGCGGATGCAGGCTTCTTCCTTGATGAGAAGGATATTGTCGGAAATAGCACAATGAGATCTTTCTATCATGATGTTGTCCAGCTCCAGGGTGTTGATAAAAGTTTGCACAAAGAGTGCCTTGCTAAAAGGGAACCATCTAAGTGTCTATTTCCATCAGAAATTCTGAAAAATGTAAAGACTCCTGTTTTCCTTGTTCATCCAGCTTATGATTTTTGGCAGATACACAATATTTTGGTACCTCAAGGATCAGATCCCCATCGTCGCTGGAAAAGATGCAGATTGAACCTTCACAATTGTGATGCTAACCAGATTCAAATCCTTGACAGTTTCCGTAGTTCTTTGCTGAAGACTGTGAATGAATTCCAGCAACGAAAGGATATTGGAATGTTTATAGATTCCTGCTTTATACATTGTCAGACTTGGATGGGGGAGACATGGCATTCACCTACTTCTCCaaaattaaaagataagACAATTGCTGAATCTGTTGCCGATTGGTTCTTTGATCGACAAGTGGTAAATCTTATTGACTGCCCTTATCCATGTAATCCTACTTGCCATAATATGGATTTCACCAGAGTATAA 1278 0.4038 MPLSHISNNFRLRNLFILFRKQFTFVALSLFLLFSFAFFTRSNPHSHDDNSHSNSILIPFTPLTNFKQIGAFCLDGSSPGYHFQKGFGSGSHNWLLHVEGGGWCNSIASCSYRKMTALGSSMYMDASVPFSGILSSVPSQNPDFFNWNKVKIRYCDGASFAGHPESEQKGSGLFFRGQIIWESIMNELLSIGMSKAEQALLSGCSAGGLATLIHCDNFRQLLPKEAAVKCLADAGFFLDEKDIVGNSTMRSFYHDVVQLQGVDKSLHKECLAKREPSKCLFPSEILKNVKTPVFLVHPAYDFWQIHNILVPQGSDPHRRWKRCRLNLHNCDANQIQILDSFRSSLLKTVNEFQQRKDIGMFIDSCFIHCQTWMGETWHSPTSPKLKDKTIAESVADWFFDRQVVNLIDCPYPCNPTCHNMDFTRV 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01133 425 PANTHER PECTIN ACETYLESTERASE 4 22 418 - -
Tsu04g01133 425 PANTHER NOTUM-RELATED 22 418 IPR004963 GO:0016787
Tsu04g01133 425 Pfam Pectinacetylesterase 53 403 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01133 Tsu-Chr4 11198699 11203584 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01133 30 389 Carbohydrate Esterase AT3G09410 61.264 2.73e-168 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01133 K19882 - gmx:100792819 632.098