Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01126 ATGGCTTCTGCTACTCCAAAAACCCCCAACAAAATCTCCATCAACAACCCCATTTCAGTTTCTAAGGTGAGGGTCATAGTTAGGGTAAGACCCTTCCTTCCTCACGAAATCACATCAAGAAATGGTGCTGACCCAGTTTCTTGTATCTCCCTTTTGGATCAAGATTCTCAATTACGTGATGAAGTAGCGGTTTATCTCAAAGACCCATATACCAGTCGTAATGAGTGTTACCAATTGGACTCATTCTTTGATCAAGATGATAATAATGTGGGTCAGATATTTCATACTGAAGTAAACCCTATGATTCCTGCTATCTTCAATGGCTGTAATGCTACTGTGTTTGCTTATGGTGCTACTGGCAGTGGAAAGACATACACTATGCAGGGAACTGAGGAACAACCTGGCCTGATGCCACTGGCAATGTCCACTATCCTGTCTATCTGTCAAAACACTGGCAGCACAGCACACATTTCATACTATGAGGTCTACATGGACCGATGTTACGATCTCTTAGAAGTAAAAGAGAATGAGATTTCAGTTTTGGATGACAAAGACGGTCAAATTCACCTCAAGGGACTATCTCAAGTTCCTGTAAACACAATGTCTGAATTTCAAGAGATTTTCTCCAGTGGTGTTCAGAGACGCAAAACTGCACACACCAGCCTCAACGATGTATCTAGTAGAAGTCATGGAGTGCTTGTGATATCTGTAGTATCGACTCATCCTGATGGAAATGGAAGTCCTGTATGTGGAAAGCTGAATCTCATAGACTTGGCAGGTAATGAAGATAACAGAAGGAGCTGCAATGAAGGGATTCGTCTTCAAGAGAGTGCAAAGATAAATCAATCCTTGTTTGCGCTGTCAAATGTAATATACGCGTTGAACAACAACAAACCAAGAATTCCCTATAGAGAGAGCAAATTGACCCGTATATTACAGGACTCTCTAGGGGGAACGAGTCGTGCACTGATGGTTGCTTGCCTGAATCCAGGAGAATACCAGGAATCTGTTCATACCGTTAGTTTGGCTGCTCGATCAAGGCACATATCTAATTTTGTAACTTCAGCGCATAAACTCGAGACGCCAAAAGTTAAAGTTGACATGGAAGCCAAATTGAGAGCTTGGCTAGAATCAAAAGGCAAGACAAATGGCTCACAACAAAGACTTGGACCGTTTAATTCTCCACTTATGAAAAAAACTCCTGGTTCCATCATTACATCTGCTAAGCGATCGGTTAATTTCAATACTTCAGTGAAGGAGGCAAGAACTTCCACCAACAAAGATGCTAAACAAACTACTGAAAGGACCTTATCTGTTTCTTGTAGAAATTTACTATATGGTGAAGTTGCTTTTGATTCTTGCAAGGAGGACAATGATAAGAGAGAGATTGAGCATGAGGCCAATAATGTTGCATGTGAATCTTATAATAATCTAACTGACGAAAAATTAAGCAAAGTGGCGAACTTGCAAATTACAAATGAGAATAAAGAGGCTGCAGTACTACAAAGTCCATTAAGAAAAGCCCTCTCTCCCATCAACATCAATGGTAATCAAAAGTATCACGAGGCTTCGCCTTTGATACAAACACCTTTCTCTGCAACCTGCTCCACTAAAAAAGGATTGCAGAAAAATTGCACTCCACTTGAAAAATTCAGTGCACAAAGTTCCACATTGAAGAATTGTTTAGTTCAAGAATACATTGATTTGTTAAATAATGCAAGCAGAGAGGAACTACTAGAGTTAAAGGGCATAGGAGGGAAAATGGCAGAATACATAATAGAACTCAGAGAAGAAAGTCCACTAAAATCGTTGACTGATTTGGAGAAGATTGGTCTCTCTTTGAAGCAGGCTCATAACTTGTTTACTAAGGCTGCAAAGAAACTCTTTGAAGATAAAGCAGAAGAGTCAATAATCAATTGA 1920 0.4 MASATPKTPNKISINNPISVSKVRVIVRVRPFLPHEITSRNGADPVSCISLLDQDSQLRDEVAVYLKDPYTSRNECYQLDSFFDQDDNNVGQIFHTEVNPMIPAIFNGCNATVFAYGATGSGKTYTMQGTEEQPGLMPLAMSTILSICQNTGSTAHISYYEVYMDRCYDLLEVKENEISVLDDKDGQIHLKGLSQVPVNTMSEFQEIFSSGVQRRKTAHTSLNDVSSRSHGVLVISVVSTHPDGNGSPVCGKLNLIDLAGNEDNRRSCNEGIRLQESAKINQSLFALSNVIYALNNNKPRIPYRESKLTRILQDSLGGTSRALMVACLNPGEYQESVHTVSLAARSRHISNFVTSAHKLETPKVKVDMEAKLRAWLESKGKTNGSQQRLGPFNSPLMKKTPGSIITSAKRSVNFNTSVKEARTSTNKDAKQTTERTLSVSCRNLLYGEVAFDSCKEDNDKREIEHEANNVACESYNNLTDEKLSKVANLQITNENKEAAVLQSPLRKALSPININGNQKYHEASPLIQTPFSATCSTKKGLQKNCTPLEKFSAQSSTLKNCLVQEYIDLLNNASREELLELKGIGGKMAEYIIELREESPLKSLTDLEKIGLSLKQAHNLFTKAAKKLFEDKAEESIIN 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01126 639 Gene3D Kinesin motor domain 19 388 IPR036961 -
Tsu04g01126 639 Pfam Kinesin motor domain 28 349 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu04g01126 639 SMART kinesin_4 20 357 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu04g01126 639 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 7 637 - -
Tsu04g01126 639 CDD KISc_KID_like 23 347 - -
Tsu04g01126 639 ProSitePatterns Kinesin motor domain signature. 251 262 IPR019821 GO:0003777|GO:0005524|GO:0007018
Tsu04g01126 639 PANTHER BNACNNG40390D PROTEIN 7 637 - -
Tsu04g01126 639 SUPERFAMILY RuvA domain 2-like 563 610 IPR010994 -
Tsu04g01126 639 PRINTS Kinesin heavy chain signature 220 237 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu04g01126 639 PRINTS Kinesin heavy chain signature 108 129 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu04g01126 639 PRINTS Kinesin heavy chain signature 301 322 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu04g01126 639 PRINTS Kinesin heavy chain signature 252 270 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu04g01126 639 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 22 378 IPR027417 -
Tsu04g01126 639 Pfam Helix-hairpin-helix motif 570 592 IPR000445 GO:0003677
Tsu04g01126 639 Gene3D - 556 627 - -
Tsu04g01126 639 ProSiteProfiles Kinesin motor domain profile. 22 349 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01126 Tsu-Chr4 11039905 11045143 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01126 22 381 Calmodulin-binding Proteins AT5G65930 32.267 1.57e-44 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01126 K10403 - gmx:100804591 931.013