Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu04g01110 | ATGTTGAAACTTGAAGAGTATGGATACATGATGAAGATAACCGAGAAAAGTGATGTTTACAGCTATGGTATAGTTGTATTAGAAGTACTAACAGGTAAGCAACCAATTGATCCAACAATACCAGATGGACTTCACATTGTTGATTGGGTTCGACAGAAAAGAGGAGGAGTTGAAGTGCTAGATGAAAACTTAAGAGCAAGACCAGAATCCGAAATCGAAGAAATGTTGCAAACTTTAGGTGTTGCATTGTTATGTGTAACCTCAAGTCCTGATGATAGACCAACAATGAAAGATGTTGTTGCAATGATGAAAGAGATTAAACAAGAAAGAGATGAATGTGTCAAGGTTTTCGATGGAACTTCTAGAAATCATCAACATGAAAGTAATCATAATGAAGTAGAATCGTCGGAAATGATGAAAGATTCATGTCCTACAActagcagcagcagcagcataAATATGCATTTACATTACTCTCCTCATAGTTCTACAACACTAAGTTAA | 504 | 0.3373 | MLKLEEYGYMMKITEKSDVYSYGIVVLEVLTGKQPIDPTIPDGLHIVDWVRQKRGGVEVLDENLRARPESEIEEMLQTLGVALLCVTSSPDDRPTMKDVVAMMKEIKQERDECVKVFDGTSRNHQHESNHNEVESSEMMKDSCPTTSSSSSINMHLHYSPHSSTTLS | 167 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu04g01110 | 167 | Pfam | Protein tyrosine and serine/threonine kinase | 11 | 101 | IPR001245 | GO:0004672|GO:0006468 | |
Tsu04g01110 | 167 | ProSiteProfiles | Protein kinase domain profile. | 1 | 106 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu04g01110 | 167 | MobiDBLite | consensus disorder prediction | 118 | 167 | - | - | |
Tsu04g01110 | 167 | MobiDBLite | consensus disorder prediction | 118 | 137 | - | - | |
Tsu04g01110 | 167 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RCH1 | 6 | 129 | - | - | |
Tsu04g01110 | 167 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED | 6 | 129 | - | - | |
Tsu04g01110 | 167 | Gene3D | Transferase(Phosphotransferase) domain 1 | 5 | 140 | - | - | |
Tsu04g01110 | 167 | MobiDBLite | consensus disorder prediction | 138 | 167 | - | - | |
Tsu04g01110 | 167 | SUPERFAMILY | Protein kinase-like (PK-like) | 10 | 126 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu04g01110 | Tsu-Chr4 | 10794780 | 10795283 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu04g01110 | 6 | 108 | Receptor kinase-like Gene Family | AT5G56040 | 57.009 | 1.80e-35 | 128 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Tsu04g01110 | PK_Tyr_Ser-Thr | 2.6e-08 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu04g01110 | - | - | gmx:100794698 | 243.817 |