Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01106 ATGGCATTTCTCAAAAACCCTTTCTCTCTCTACatttcaatcttcatcttcttctgtttcttcaacAAAGCTTCAACTAAAACTATACCTCCTTCAACTTCTTCTGATGTTGAacttcttttattaaaaatcaaacCTTTACTTCAAGGTAACACTGAAAACCTTGTTCTTTCTTCATGGAACACTTCAATACCACTTTGTCAATGGAGAGGACTTAAATGGGTATTCATAAATGGTTCATCTCTTTCATGCAATGATTTATCTTCACCACAATGGAataatcttttgttttttaaagaCCCTTTTTTGCATTTGTTGTCTCTTCAACTTCCTTCTGCAAATCTCTCTGGTTCTCTCCCTAGAGAGATTGGTCAGTTTCCTATGTTGAAAAGTgtttatcttaatattaattCATTGAGTGGTACTATTCCTCTTGAACTTGGTTATGGTTCTTCACTCGATGATATTGATTTTAGTGATAATCTTTTGAGTGGTGTTCTTCCACCTTCTATATGGAATTTGTGTGATAAACTTGTTTCTCTTAAAATTCATGGAAATTTATTATCTGGGTCTGTTTCAGAACCTGCATTACCTGATTCATCTTGTAAATTTTTGCAGTTTCTTGATTTGGGTGGTAATAAATTTTCTGGTAATTTTCCTGATTTTGTTACTAAATTTGGTGCCCTAAAAGAGCTTGATTTAGGGAATAATATGTTTAGTGGTGCAATTTCTGAGGGTTTAGTTGGACTTAGGTTAGAAAAATTGAatctttctcataataattTTAGTGGGGTTGTTCCGTTTTTCGGTGAATCGAAATTTGGTGTTGATGCTTTTGAAGGGAATAGTCCTGATTTATGTGGTTCACCTTTGAAAAGTTGTAGTACGAATTCGTCATTGAGTTCTGGTGCTGTTGCTGGTATTGTTATTAGTCTTATGACAGGTGCTGTTGTTTTGGCTTCGTTGTTGATCGGTTATAtgcaaaacaagaagaaaaagggGAGTGGTGAGAGTGAAGATGAAttgaatgatgaagaagaagacgaagaaaacGGTGGTGGAAATTCGGTTGGTGGAAATGGTGGTGAAGGGAAACTTATGTTATTTCCTGGTGGTGAGAATTTGACACTTGATGATGTGTTGAATGCGACCGGTCAAGTTATGGAGAAGACGTGTTATGGAACAGCTTATAAGGCTAAGCTTGCTGATGGTGGAACAATTGCTTTGAGGTTGTTGAGAGAAGGTACTTGCAAGGATAGGAGTTCGTGTTTGGCGGTTATTAAACAGTTGGGAAAAATTCGACATGAGAATTTGATACCTTTGAGAGCTTTCTATCAAGGAAAAAGAGGGGAGAAGCTGCTTATTTATGATTATTTGCCTCTCAAAACTCTTCATGATCTTTTGCATGAAATTAAAGCTGGAAAACCAGTGCTGAACTGGGCTAGGAGACACAAAATTGCATTAGGTATAGCAAGAGGACTAGCATATCTTCATACAGGACTCGACGATCCTATAACTCACGCAAATGTAAGATCCAAGAACGTGCTTGTGGACGACTTCTTTGTTGCTAGGATCACCGATTTCGCCCTCGATAAGCTAATGATCCCTTCAATAGCCGACGAAATGGTTGCGCTTGCCAAGGCAGATGGCTACAAAGCACCGGAGCTTCAAAGAATGAAGAAATGTAACTCAAGGACCGATGTCTACGCGTTCGGTATATTACTTCTTGAAATCTTGATCGGTAAGAAGCCTGGTAAGAATGGAAGAAGCGGTGAGTACGTGGATTTACCTTCGATGGTGAAAGTAGCTGTTTTGGAAGAAACAACGATGGAAGTGTTCGATGTGGAACTGTTGAAAGGGATAAGAAGTCCAATGGAAGACGGGTTGGTTCAAGCGCTGAAGTTAGCGATGGGATGTTGTGCGCCTGTAGCATCGGTAAGACCGAGCATGGAAGAAGTTGTGAGGCAGTTGGAGGAGAATAGACCAAGGAATAGGTCTGCTTTATACAGTCCAACTGAGACAAGAAGTGGGAGCATTACACCATTTTGA 2049 0.368 MAFLKNPFSLYISIFIFFCFFNKASTKTIPPSTSSDVELLLLKIKPLLQGNTENLVLSSWNTSIPLCQWRGLKWVFINGSSLSCNDLSSPQWNNLLFFKDPFLHLLSLQLPSANLSGSLPREIGQFPMLKSVYLNINSLSGTIPLELGYGSSLDDIDFSDNLLSGVLPPSIWNLCDKLVSLKIHGNLLSGSVSEPALPDSSCKFLQFLDLGGNKFSGNFPDFVTKFGALKELDLGNNMFSGAISEGLVGLRLEKLNLSHNNFSGVVPFFGESKFGVDAFEGNSPDLCGSPLKSCSTNSSLSSGAVAGIVISLMTGAVVLASLLIGYMQNKKKKGSGESEDELNDEEEDEENGGGNSVGGNGGEGKLMLFPGGENLTLDDVLNATGQVMEKTCYGTAYKAKLADGGTIALRLLREGTCKDRSSCLAVIKQLGKIRHENLIPLRAFYQGKRGEKLLIYDYLPLKTLHDLLHEIKAGKPVLNWARRHKIALGIARGLAYLHTGLDDPITHANVRSKNVLVDDFFVARITDFALDKLMIPSIADEMVALAKADGYKAPELQRMKKCNSRTDVYAFGILLLEILIGKKPGKNGRSGEYVDLPSMVKVAVLEETTMEVFDVELLKGIRSPMEDGLVQALKLAMGCCAPVASVRPSMEEVVRQLEENRPRNRSALYSPTETRSGSITPF 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01106 682 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 8 682 - -
Tsu04g01106 682 Gene3D Phosphorylase Kinase; domain 1 371 458 - -
Tsu04g01106 682 ProSiteProfiles Protein kinase domain profile. 382 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g01106 682 Gene3D Ribonuclease Inhibitor 36 197 IPR032675 -
Tsu04g01106 682 Gene3D Transferase(Phosphotransferase) domain 1 460 674 - -
Tsu04g01106 682 SUPERFAMILY L domain-like 69 268 - -
Tsu04g01106 682 SUPERFAMILY Protein kinase-like (PK-like) 391 658 IPR011009 -
Tsu04g01106 682 MobiDBLite consensus disorder prediction 332 361 - -
Tsu04g01106 682 Pfam Protein tyrosine and serine/threonine kinase 386 657 IPR001245 GO:0004672|GO:0006468
Tsu04g01106 682 MobiDBLite consensus disorder prediction 663 682 - -
Tsu04g01106 682 MobiDBLite consensus disorder prediction 657 682 - -
Tsu04g01106 682 Gene3D Ribonuclease Inhibitor 198 296 IPR032675 -
Tsu04g01106 682 PANTHER KINASE-LIKE PROTEIN TMKL1-RELATED 8 682 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01106 Tsu-Chr4 10764062 10767015 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01106 11 682 Receptor kinase-like Gene Family AT3G24660 72.957 0.0 920
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tsu04g01106 PK_Tyr_Ser-Thr 4.1e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01106 - - gmx:100814814 1078.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g01106 04 10764062 10767015 Tsu04g01106 04 10764062 10767015 ECH