Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01087 aTGGGAAAATACATGAAGAAATCCAAAATCGCCGGCGACGTCGCCGCCGTAATCATGGATTCTCCATCACACGCCTCAACCGTCGGTGTACGAACAAGAGCAAAAACCCTCGCTCTCCAGAAATCACCGGTTTCCTCGCCGCAAAATATTGACTCCTCTTCCTACCTCCAACTTCGCAGTCGTCGCCTCCGTAAACTCCCTCCGCCGCCGCAACCACGCAGGGAAAACGCCTCTGCCGGAAATTCCAGACTTCGAGAATGTTCTGGCAAAACGTCGTCGTCCGTTGAAAAATTGGGAAGTTTCGGTGCTGAACAGGAGAATGTTGATTTAACTGTAGAAGGTTCTTTCGGTGAAAATTACTTAGAAAATGAAGGAAGAGATAGAAGCACCAGGGAAAGCACACCTTGTAGTTTAATAAGGGATTCAAGTGTCATTCATACCCCAGGTTCAACGACAAGGCAAAGGACGCAACGAGTAATTCACGAAAACGTACAAAGAAATATTCCAACATCTAGTGAAATGGATGAGTTCTTTGCTTTAGCAGAGAAGCAGCAACAAGCTATATTTATGGAAAAGTACAATTTTGATGTAGTGAATGATGTACCTCTACCAGGACGATATGAATGGGTCCCTGTACTTGATTAG 645 0.4527 MGKYMKKSKIAGDVAAVIMDSPSHASTVGVRTRAKTLALQKSPVSSPQNIDSSSYLQLRSRRLRKLPPPPQPRRENASAGNSRLRECSGKTSSSVEKLGSFGAEQENVDLTVEGSFGENYLENEGRDRSTRESTPCSLIRDSSVIHTPGSTTRQRTQRVIHENVQRNIPTSSEMDEFFALAEKQQQAIFMEKYNFDVVNDVPLPGRYEWVPVLD 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01087 214 Pfam Cyclin-dependent kinase inhibitor 166 212 IPR003175 GO:0004861|GO:0005634|GO:0051726
Tsu04g01087 214 MobiDBLite consensus disorder prediction 61 102 - -
Tsu04g01087 214 MobiDBLite consensus disorder prediction 75 100 - -
Tsu04g01087 214 PIRSF CKI_KRP_plant 1 213 IPR044275 GO:0004861|GO:0045736|GO:0051726
Tsu04g01087 214 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 1 213 - -
Tsu04g01087 214 Gene3D p27 152 214 IPR044898 -
Tsu04g01087 214 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 1 213 IPR044275 GO:0004861|GO:0045736|GO:0051726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01087 Tsu-Chr4 10557085 10560065 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01087 1 212 Core Cell Cycle Gene Families AT5G48820 45.714 1.39e-50 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01087 - - gmx:100782379 231.876