LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tsu04g01087	aTGGGAAAATACATGAAGAAATCCAAAATCGCCGGCGACGTCGCCGCCGTAATCATGGATTCTCCATCACACGCCTCAACCGTCGGTGTACGAACAAGAGCAAAAACCCTCGCTCTCCAGAAATCACCGGTTTCCTCGCCGCAAAATATTGACTCCTCTTCCTACCTCCAACTTCGCAGTCGTCGCCTCCGTAAACTCCCTCCGCCGCCGCAACCACGCAGGGAAAACGCCTCTGCCGGAAATTCCAGACTTCGAGAATGTTCTGGCAAAACGTCGTCGTCCGTTGAAAAATTGGGAAGTTTCGGTGCTGAACAGGAGAATGTTGATTTAACTGTAGAAGGTTCTTTCGGTGAAAATTACTTAGAAAATGAAGGAAGAGATAGAAGCACCAGGGAAAGCACACCTTGTAGTTTAATAAGGGATTCAAGTGTCATTCATACCCCAGGTTCAACGACAAGGCAAAGGACGCAACGAGTAATTCACGAAAACGTACAAAGAAATATTCCAACATCTAGTGAAATGGATGAGTTCTTTGCTTTAGCAGAGAAGCAGCAACAAGCTATATTTATGGAAAAGTACAATTTTGATGTAGTGAATGATGTACCTCTACCAGGACGATATGAATGGGTCCCTGTACTTGATTAG	645	0.4527	MGKYMKKSKIAGDVAAVIMDSPSHASTVGVRTRAKTLALQKSPVSSPQNIDSSSYLQLRSRRLRKLPPPPQPRRENASAGNSRLRECSGKTSSSVEKLGSFGAEQENVDLTVEGSFGENYLENEGRDRSTRESTPCSLIRDSSVIHTPGSTTRQRTQRVIHENVQRNIPTSSEMDEFFALAEKQQQAIFMEKYNFDVVNDVPLPGRYEWVPVLD	214

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tsu04g01087	214	Pfam	Cyclin-dependent kinase inhibitor	166	212	IPR003175	GO:0004861\|GO:0005634\|GO:0051726
	Tsu04g01087	214	MobiDBLite	consensus disorder prediction	61	102	-	-
	Tsu04g01087	214	MobiDBLite	consensus disorder prediction	75	100	-	-
	Tsu04g01087	214	PIRSF	CKI_KRP_plant	1	213	IPR044275	GO:0004861\|GO:0045736\|GO:0051726
	Tsu04g01087	214	PANTHER	CYCLIN-DEPENDENT KINASE INHIBITOR	1	213	-	-
	Tsu04g01087	214	Gene3D	p27	152	214	IPR044898	-
	Tsu04g01087	214	PANTHER	CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED	1	213	IPR044275	GO:0004861\|GO:0045736\|GO:0051726

Showing 1 to 7 of 7 entries

Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Tsu04g01087	Tsu-Chr4	10557085	10560065	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tsu04g01087	1	212	Core Cell Cycle Gene Families	AT5G48820	45.714	1.39e-50	162

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tsu04g01087	-		-	gmx:100782379	231.876

Showing 1 to 1 of 1 entries