Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01062 ATGGATGCCATCATTTCCTTTGTTGGAAGCGTAGTACCATATGCTTTTGCTCCTATTCGAAGAGAAGTGGGTTATTTGATACTCTATGAACGTAATTTCACCAGGCTAATTGGTTGTGTTAGCAATCTTCAAGTTGTAAGAGAAGCAATAAACCATAGGGTGGAAGCTGaaagaagaaatggaaaaataattgAAGTTGGAGTTCAAAACTGGTTGGTGGAGGTGAACAATGTCATTGAAAGGGCAAATCAGATCCTGGGAGATCCTCGCCGTCGAGAGGTTGGGTGTTCGGGATGGTCTTTTCCTAATTTGATTTTACGACATCAGCTTGGCAAAATAGCTACAAAGATAGCAAATGATGTTGCTGAAGTTCAGGGAAGAAGTGATTTCAAAGAAGTTGGTTACCTTCCTGCTCTAGATGAAATTGCCTCTTCTTCTGCAGCACGTGGAGTTGAAAATCTTGAGACAAGGGAAACATTTAAGGAAGACATCTTGAAGGCTCTCAAGGACCCTAAAGCATGCAACATTGGAGTCTATGGTATCGGTGGAGTGGGTAAGACCTTTCTAGTGAAAGAAGTCGCTAAAATAGCCAAACAACAATTGTTCGATGAAGTGGTTATCGCCCTTGTATCTAAAACTCCAGATATTAAGGAAATTCAAGGGGTGATTGCAGATATGTTGGGTCTGACATTTGGAGAAGAAAGTATTGATGGTAGAGCTAACCGCCTAAAGATGAGAATTAAAGCTGAGAAATCTATCCTTGTTATTCTAGATGATATTTGGCAGCCACTTGAACTGGAAAAAGTAGGAATTCCATCCAACAAGGAACACATTGGTTGCAAATTGTTTATGACCTCTAGAACTCAAGATGTGTTGCAGAATATGTCCGCCCAAAAGGATTTCACATTCAGACTTGAACTTCTAAGTGATGTAGAAACAAGGATTTTATTTCAATCTACGGTAGAGGATGTGTATAACGATATCAGCTTCAAAGATGTAGCAACTCAAATAGCCAAACAATGTGCAGGTTTGCCTCTTCTCATAGTGACAGTGGCAAGCGGTTTGAAAAGTAAGGATATTTCTGCTTGGAAAGACGCATTGAGCCAATTAGAAAGTGTTGGTCATAAGAAAATGGATGACATAGTTCGTTCTGCTTTAGAGTTAAGTTACAACTGGTTGGCAACTAACGAAATTAAGGCACTCTTCGTGCTTTCTGCTGTACTAGGAGACTTTCCTAATGAAGATTACTTATTGAAAGTTGTAATGGGTTTGAAGATATTCAAGAATATAAGTACTGTGGATTGTGCAAGAAACAGACTTCATACTATAATTGAATCATTGAAAGCATCTTGCCTGTTACTTGAAGGTAGTAAGAGAAGTCGGCGTATTCAAATGCATGACCTTGTTCGTGATGTAGGTATATCAATAGCATGTAGAAATAAAGATGTTTATATGTTGAAACCGAAGACTGGTTTGAAGGAATATCTTACCATGATTTTTTCGAAAATGTGCTCACAGATCATCTTATCAAATTGTCTTTTACAAGAGCTTCCAAAAAAGTTAGATTGTCCTAATCTTAAACTTTTCTATTTGGACAGTGGAAATCGTACTTTAGAAATCCCAGATACTCTTTTTGATGGAATGGGAAGCCTTAAAGTATTAGATTTAACACGTCTGAACTTGTCTTCATTACCCACTTCTTTTCATTCCCTAACAGGCCTCCAAACATTGTGCTTGGACCAATGCGTTTTGGAAAATATGGATATAGTTGGAGATTTGAAAAACTTAGAAGTTCTTAGCCTTTGGAAATCTTCGATGATCAAATTGCCAAGCAAAATAAGGGAAATGACTCAACTAAGAATGCTTGATTTGAGCAATTCCGGAATAGAAGTCATTCCACCCAACATCATTTCAAGCTTGTCTAACTTAGAGGAGTTGTATATGGGCAATATCTCCATCAAGTGGGAGGATGAAAATTCAGTCGAGCAAAACGAAAATGATATCCTTGCTGAGCTTCGACAATTGTACAACTTGACAACTCTAGAACTACAAATTCACAAGGCTCGACCTTTGCCATACTTAAATCCAATATTTGAAAAGCTGCAAAGATATAAAATAGCCATCGGAGATGTATGGGAATGGTCTGACATTAACAACACAACTTTGAAAACACTGATGCTCAAACTGGATGCCAACATACATTCTGAGCTGGGGattaaagcattaattaaaGGGGTCGAGAATTTGTACATGGATGAAGTAGATGGCATTCAGAATGTGTTGTATGAAATAAACGAGGATGGTTTTCCATCGTTGAGGCACCTCCACATCCAAAACAATGCAAAAATGAAACACATAGTTGACTCTATGGAGAGGAACCAAGCCCTTGTTTCCTTTCCCATCTTGGAAACTCTTTCAATTaataatcttgaaaatttgGAGCAGATATGTCATGGTCCGCTTGCTATTAATTCCTTTAGTAAGCTCAGTGttatcaaagtaaaaaattgtgctCAATTGACATATCTTCTCTTCTTATCAATGGTTAACAGACTTTCCAATCTTTCTGAAATCGAAGTTTGTCAATGCAATTCTATGAAGAACATAGTGCTCGGAGACTTGCCTGATGAAAAAGTAGAGTTTCGTTCTTTGCGTTCTTTAACTTTACAACAGTTGGATACACTTGatcattttttctcttatgAGCTGATGACATCTTCGATAACTTCTACACGGCCATTTCTTAGTGCTCAGGTTGCATTCCCTGATTTGGTAACCCTTAAATTGAGCTCCCTCAATTGTGGTGGCCAAAAGTACTTATTTTCTTCTACCATGGTTGAATGTTTTGTAAACCTCAAACGGCTTGAAATTAGTAAATGTAATTTGATGAATGAGATAATAGCTACAGAAAAGAGAAATGATGTTACTATTGCAATGAATGAGGTTCCATTTCCCAAATTGGAGACAATCGTGCTGAAGGATATGGAAAATTTGAAGACAGTATGGCATTACCAATTTGACACAGTGAAGACATTGCAAGTCCaaaattgtgagaaaattgTGGTTGTTTTTCCTTCATCAATGCAGAAGACTTATCGTAATCTGGAGATGTTTGTGGTTAAGGATTGTGCTTTagtggaaaatatatttgaattgaGTTCTAGTGAAAATAACAGCATAGAAAGTACAACACATTTGAAAGTAATTACATTGGATGGACTGCCGAAGTTGAGAACAATATGGAGTAGAGATCCTCAAGGCATTCTTAATTTTCATAATCTACAAAATGTTGATCTAAATCATTGTGATAGTATGGAGTATCTATTTCCGTTTTCTGTAGCCACTGCCTTCCCACATCTCGAAGTACTTGAAATAAAATTGTGTTATAAGATGAAGGAAATTGTTTCAGAAAAGATAGAATCCACATGTGCAAATCCCACATTTCAGTTTAATCAGCTAAATACCATAGTGATGTGGGGCTTAGTTTCACTCAAGGGTTTCTATGCAGGAAATCATATTCTAACATGCCCCTCTTTGAGAAAACTAGATGTTTTTGGATGTGCAAAGTTGAATTTATACAAAAATGTAGCTCCGTCTGCATGCAGCCTCCAAAGATGTCAAGATGAGAACTTCTCAGATTTATTCCAACCACTTTTCATTGCGAAAGAGGTATGTATCATAAAAATTGACATATTCATTTTCACTTTTTGA 3711 0.3624 MDAIISFVGSVVPYAFAPIRREVGYLILYERNFTRLIGCVSNLQVVREAINHRVEAERRNGKIIEVGVQNWLVEVNNVIERANQILGDPRRREVGCSGWSFPNLILRHQLGKIATKIANDVAEVQGRSDFKEVGYLPALDEIASSSAARGVENLETRETFKEDILKALKDPKACNIGVYGIGGVGKTFLVKEVAKIAKQQLFDEVVIALVSKTPDIKEIQGVIADMLGLTFGEESIDGRANRLKMRIKAEKSILVILDDIWQPLELEKVGIPSNKEHIGCKLFMTSRTQDVLQNMSAQKDFTFRLELLSDVETRILFQSTVEDVYNDISFKDVATQIAKQCAGLPLLIVTVASGLKSKDISAWKDALSQLESVGHKKMDDIVRSALELSYNWLATNEIKALFVLSAVLGDFPNEDYLLKVVMGLKIFKNISTVDCARNRLHTIIESLKASCLLLEGSKRSRRIQMHDLVRDVGISIACRNKDVYMLKPKTGLKEYLTMIFSKMCSQIILSNCLLQELPKKLDCPNLKLFYLDSGNRTLEIPDTLFDGMGSLKVLDLTRLNLSSLPTSFHSLTGLQTLCLDQCVLENMDIVGDLKNLEVLSLWKSSMIKLPSKIREMTQLRMLDLSNSGIEVIPPNIISSLSNLEELYMGNISIKWEDENSVEQNENDILAELRQLYNLTTLELQIHKARPLPYLNPIFEKLQRYKIAIGDVWEWSDINNTTLKTLMLKLDANIHSELGIKALIKGVENLYMDEVDGIQNVLYEINEDGFPSLRHLHIQNNAKMKHIVDSMERNQALVSFPILETLSINNLENLEQICHGPLAINSFSKLSVIKVKNCAQLTYLLFLSMVNRLSNLSEIEVCQCNSMKNIVLGDLPDEKVEFRSLRSLTLQQLDTLDHFFSYELMTSSITSTRPFLSAQVAFPDLVTLKLSSLNCGGQKYLFSSTMVECFVNLKRLEISKCNLMNEIIATEKRNDVTIAMNEVPFPKLETIVLKDMENLKTVWHYQFDTVKTLQVQNCEKIVVVFPSSMQKTYRNLEMFVVKDCALVENIFELSSSENNSIESTTHLKVITLDGLPKLRTIWSRDPQGILNFHNLQNVDLNHCDSMEYLFPFSVATAFPHLEVLEIKLCYKMKEIVSEKIESTCANPTFQFNQLNTIVMWGLVSLKGFYAGNHILTCPSLRKLDVFGCAKLNLYKNVAPSACSLQRCQDENFSDLFQPLFIAKEVCIIKIDIFIFTF 1236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01062 1236 Gene3D - 140 302 IPR027417 -
Tsu04g01062 1236 PANTHER - 23 1070 - -
Tsu04g01062 1236 PANTHER - 1091 1190 - -
Tsu04g01062 1236 SUPERFAMILY L domain-like 464 890 - -
Tsu04g01062 1236 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 402 IPR027417 -
Tsu04g01062 1236 PRINTS Disease resistance protein signature 175 190 - -
Tsu04g01062 1236 PRINTS Disease resistance protein signature 341 355 - -
Tsu04g01062 1236 PRINTS Disease resistance protein signature 614 630 - -
Tsu04g01062 1236 PRINTS Disease resistance protein signature 247 261 - -
Tsu04g01062 1236 Gene3D - 308 393 IPR042197 -
Tsu04g01062 1236 SUPERFAMILY RNI-like 920 1188 - -
Tsu04g01062 1236 Pfam Leucine rich repeat 524 582 IPR001611 GO:0005515
Tsu04g01062 1236 Pfam NB-ARC domain 158 391 IPR002182 GO:0043531
Tsu04g01062 1236 PANTHER RPP4C3 1091 1190 - -
Tsu04g01062 1236 Gene3D Ribonuclease Inhibitor 502 906 IPR032675 -
Tsu04g01062 1236 Gene3D Ribonuclease Inhibitor 907 1211 IPR032675 -
Tsu04g01062 1236 PANTHER RPP4C3 23 1070 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01062 Tsu-Chr4 10366660 10377433 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01062 176 569 WRKY Transcription Factor Family AT5G45050 21.975 3.18e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01062 - - cam:101493922 1652.88