Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01052 ATGGCTTTCACAATTGCACAAATTTTCCTCCTAGTCATGTTATTTTCCTTCCAATATTGTTCATGTTATTTAACATCATTGACAAAGGGTTCATCTTTATCAGTAGATAAACATGAAGAAGATGTAATTGTCTCTTCAAATGGAATATTCTCAGCTGGATTCTATCAAATTGGAGAAAATGCATTTTCATTTGCCATATGGTTTACAGAGCTGCAGAATCAAAGTCATGATCCAACCAATATTGTTTGGATGGCAAACCGTGAACAACCTGTGAATGGTAatAAATCAAAGCTTTTCCTCTTAAAAACGGGTAACATCCTCTTGCTTGATGCGGGTCAACACAACACTTGGTCTTCAAACACAGCATCAAATGCACCATTAGAGTTGTATCTCAAACAAGATGGTAATCTTGTGTTACGTGAGCTTCAAGGAACTACCATCTTGTGGCAAAGTTTTAATTTTCCAACAAACACTCTCCTTCCTAATCAACCTCTCACTAGACACACAAATCTTGTTTCTTCAAGAAGCCAGAGTAATCATTCTGCTGGTTTCTATAAGTTGTTCTTTGATGATAACAATATTATTCGTCTCGATTATGATGGTCCTGATGTTTCCAGTACATATTGGCCTCCATCTTGGTTATTAGCCTGGCAAGCTGGAAGGTCCAATTACAATAGTACTAGAATTGCATTGTTGGATTCTCTTGGAAGGTTTATTTCATCTGATAATTACATTTTTTCCACAAATGATTATGGTATGGTTATACAAAGAAGATTAACTATGGATTCTGATGGTAATATTCGAGTTTACAGTCGAAAAAACGTGTCAGATAATTGGTATGTTTCATGGCAAGTCATATCTAATACTTGCATCATTCATGGAATTTGTGGTGCAAATAGCACTTGTAGCTATGATCCTAAAAATGGTAAGAAATGCTCTTGTTTGCCCGGATACAAAGTGAAGAACCATAGTGATTGGTCTTACGGTTGTGAACCTATATTTGATTTTACTTGCAATAGAAGTGACGAGTCTacctttttaaaattacaaggTTACGAGTTCTTTGGTTATGACAgtaattttgttcaaaatattACCTACAAAAATTGTGAGAGTTTATGTTCACAAGATTGTAACTGTACAGCATTTCAATACACATATCCAGAGGGTAGTAACATCTTCCAATGCTATACAAAGCTACAATTGTTGAACGGGAGGTATTCACCGAGTTTTCTAGGAACAACTTACGTGAGAATTCCGAAAGGTAAAAACTTCTCTAAAGAAGAGTCTGTGAGTGTAAATGATGAAGTTTGTATATTGCAACTTCATAGAGACTATGCCATAAAACCAACAAGTAGTATGGTGAAGTTTTTTCTGTGGCTTTCAATTACAGTTGGTGGTTTAGAATTTGTTTgcttttttgtggtttttgttcttttaaataAGACCAACAAAAATTCTAATGCAAATCAACAAAACCATTATCATGCAATATTGGGATTTAGAAGATATAGTTACTCTGAGTTGAAGTTAGCAACAAAGAATTTCAGTAATGAGATTGGAAGAGGTGGAGGAGGAGTTGTCTATAGAGGTAAATTGCCGGATCAAAGACATGTAGCCGTAAAGAGATTGTATGAAGCTCAACAAGGAGAAGGAGAGTTTCTTGCTGAAGTAAGCATCATTGGAAGGCTTAACCACATGAACTTGATTGAAATGTGGGGTTATTGTGTTGAAGGTAAGCACAGACTCTTGGTATATGAGTACATGGAAAATGGTTCTTTAGCTGAAACTCTTTCATCTAAAACTAATATCCTGGATTGGAGTAAAAGGTATGATATTGCTTTAGGAACATCTAGAGTTTTAGCTTATCTACATGAAGAATGTTTGGAGTGGATTTTGCATTGTGATATAAAGCCACAAAATATACTTCTTGATTCTAACTTTCAACCCAAGTTAGCAGATTTTGGATTATCTAAGCTGAAAAGTAGAAACAATTTGAATAATAATTCAGAATTCTCAATGATAAGAGGAACAAGAGGATACATGGCACCagagtggattttcaatttACCAATAACGTCTAAAGTAGATGTTTATAGTTACGGGGTTGTTTTGTTGGAGATGATAACCGGAAAGAGTCCAACAATGATGAATATAGAAGGAGGTGATGGAGAAGTAGCATATAATGGAAGGTTGATAACTTGGGTAAGAGAGAAAAAGAGGAGTTGTGGTACATATTGGGTGGATGAAATTATTGATCCATCAATGGTGAATAATTGTGATTTAAGTAAGATGGAAGTTTTGGCTAGAGTTGCTTTGGATTGTGTTGAGGAAGATAGAGATATTAGACCTACAATGAGTCAAGTGGTTGAAATGCTTCAAAGTTGTGAGAGAGAT 2397 0.3425 MAFTIAQIFLLVMLFSFQYCSCYLTSLTKGSSLSVDKHEEDVIVSSNGIFSAGFYQIGENAFSFAIWFTELQNQSHDPTNIVWMANREQPVNGNKSKLFLLKTGNILLLDAGQHNTWSSNTASNAPLELYLKQDGNLVLRELQGTTILWQSFNFPTNTLLPNQPLTRHTNLVSSRSQSNHSAGFYKLFFDDNNIIRLDYDGPDVSSTYWPPSWLLAWQAGRSNYNSTRIALLDSLGRFISSDNYIFSTNDYGMVIQRRLTMDSDGNIRVYSRKNVSDNWYVSWQVISNTCIIHGICGANSTCSYDPKNGKKCSCLPGYKVKNHSDWSYGCEPIFDFTCNRSDESTFLKLQGYEFFGYDSNFVQNITYKNCESLCSQDCNCTAFQYTYPEGSNIFQCYTKLQLLNGRYSPSFLGTTYVRIPKGKNFSKEESVSVNDEVCILQLHRDYAIKPTSSMVKFFLWLSITVGGLEFVCFFVVFVLLNKTNKNSNANQQNHYHAILGFRRYSYSELKLATKNFSNEIGRGGGGVVYRGKLPDQRHVAVKRLYEAQQGEGEFLAEVSIIGRLNHMNLIEMWGYCVEGKHRLLVYEYMENGSLAETLSSKTNILDWSKRYDIALGTSRVLAYLHEECLEWILHCDIKPQNILLDSNFQPKLADFGLSKLKSRNNLNNNSEFSMIRGTRGYMAPEWIFNLPITSKVDVYSYGVVLLEMITGKSPTMMNIEGGDGEVAYNGRLITWVREKKRSCGTYWVDEIIDPSMVNNCDLSKMEVLARVALDCVEEDRDIRPTMSQVVEMLQSCERD 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01052 799 Pfam Protein kinase domain 517 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g01052 799 ProSiteProfiles Protein kinase domain profile. 514 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g01052 799 Gene3D Phosphorylase Kinase; domain 1 477 588 - -
Tsu04g01052 799 ProSiteProfiles Bulb-type lectin domain profile. 18 152 IPR001480 -
Tsu04g01052 799 Gene3D - 155 282 IPR036426 -
Tsu04g01052 799 PIRSF SRK 1 798 IPR024171 GO:0004674
Tsu04g01052 799 Pfam D-mannose binding lectin 81 170 IPR001480 -
Tsu04g01052 799 CDD B_lectin 43 155 IPR001480 -
Tsu04g01052 799 CDD PAN_AP_plant 337 420 - -
Tsu04g01052 799 ProSiteProfiles PAN/Apple domain profile. 338 420 IPR003609 -
Tsu04g01052 799 SMART blect_4 34 155 IPR001480 -
Tsu04g01052 799 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 4 798 - -
Tsu04g01052 799 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
Tsu04g01052 799 Gene3D Transferase(Phosphotransferase) domain 1 589 799 - -
Tsu04g01052 799 ProSitePatterns Protein kinases ATP-binding region signature. 520 542 IPR017441 GO:0005524
Tsu04g01052 799 Pfam PAN-like domain 340 398 IPR003609 -
Tsu04g01052 799 Pfam S-locus glycoprotein domain 249 321 IPR000858 GO:0048544
Tsu04g01052 799 SUPERFAMILY Protein kinase-like (PK-like) 489 794 IPR011009 -
Tsu04g01052 799 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 172 IPR036426 -
Tsu04g01052 799 ProSiteProfiles EGF-like domain profile. 286 324 IPR000742 -
Tsu04g01052 799 CDD STKc_IRAK 533 794 - -
Tsu04g01052 799 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 4 798 - -
Tsu04g01052 799 SMART serkin_6 514 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g01052 799 Gene3D - 19 154 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01052 Tsu-Chr4 10228883 10233283 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01052 504 797 Trihelix Transcription Factor Family AT5G38560 41.806 3.64e-62 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Tsu04g01052 Pkinase 1.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01052 - - gmx:100784287 1112.06