Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01051 ATGGCTTTCACAGTTTCACATATTTTCCTTCTAATAATCTTTCTATTTCCTTTCCAATATTGTTCATGTTATTTAACATCATTGAAAAAGGGTTCATCTTTATCAGTAGAGAAATATGAAGAAGATGTAATTGTCTCTTCAAATGGAATATTCTCAGCTGGATTCTATCAAATTGGAGAAAATGCATTTTCATTTGCCATATGGTTTACAGAGCTGCAGAATCAAAGTCATGATCCAACCAATATTGTTTGGATGGCAAACCGTGAACAACCTGTGAATGGTAAGCATTCAAAGCTTTTCTTCTTAGACACAGGTAACATCCTCTTGCTTGATGCGGGTCAACACCACACTTGGTCTTCAAACACAGCATCAAATGCACCATCAGAGTTGTATCTCAAACAAGATGGTAATCTTGTGTTACGTGAACTTCAAGGAACTACCATCTTGTGGCAAAGTTTTAATTTTCCAACAAACACTCTCCTTCCTAATCAACCTCTCACTAGACACACAAATCTTGTTTCTTCAAGAAGCCAGAGTAATCATTCTGCTGGTTTCTATAAGTTGTtctttgatgataacaatgttaTTCGTCTCGATTATGATGGTCCGGATGTTTCCAGTACATATTGGCCTCCATCTGTGTTATTACCCTGGCAAGCTGGAAGGTCCAATTACAATAGTACTAGAATTGCATTGTTGGATTCTCTTGGAAAGTTCATTTCATctgataattatattttttccaCATATGATTATGGAATTGATATGCAAAGAAGACTGACCATGGATTTTGATGGTAATATTCGAGTTTACAGTCGAAAAAACGTGTCAGATAATTGGTACGTTTCATGGCAAGTAATATCTGATAGTTGTATCATTCATGGAATTTGTGGTGCAAATAGCACTTGTAGCTATGATCCTAAAAATGGTAAGAAATGCTCTTGTTTGCCAGGGTATCAAGTAAAGAACCATAGTGATTGGTCTTATGGCTGTGAACCTATGTTTGATTTTACTTGCAATAGAAGTGAATCTacctttttaaaactaaaaGGGTTTGAGCTTTATGGATATGACAGTAACTTTGTTTATAACAGTACCTACGAAAGTTGTGAGAATTTATGTTTACAAGATTGTAATTGTACGGCATTTCAATACAAATATGAAGAAGACCAAGGCATGTTCAAATGTTTTACTAAGCTACAATTGTTGAATGGGAGGCATTCACCAGGTTTTCTAGGAACAACTTACTTGAGACTTCCAAAAGGTAATAACTTCTTCAAAGAAGAGTCAATGAGTCTACAAGATCATGTTTGTAGGGTGCAGCTTCACAAAGACTATGCCAAAAAACCAACAAGTAAATTGGTGAAGTTTTTTCTTTGGCTTTCAATTGTAGTTGGtggtttagaatttttaatcttttttgtggtttttgtttttttaaatcaaaccaACAAAAAGTCTAATGCAAATCATCAAAACCATTATCATGCAATATTGGGATTTAGAAGATATAGTTACTCTGAGTTGAAGTTAGCAACAAAGAATTTCAGTAATGAGATTGGAAGAGGTGGAGGAGGAGTTGTCTATAAAGGTACATTGCCTGATCAAAGACATGCAGCAGTAAAGAGATTGAATGAAGCTCAACAAGGAGAAGGAGAGTTTCTTGCTGAAGTAAGCATCATTGGAAGGCTTAACCACATGAACTTGATTGAAATGTGGGGTTATTGTGTTGAAGGTAAGCACAGACTCTTGGTATATGAGTACATGGAAAATGGTTCTTTAGCTGAAACTCTTTCATCTAAAACTAATATCCTGGATTGGAGTAAAAGGTATGATATTGCTTTAGGAACATCTAGAGTTCTAGCTTATCTACATGAAGAATGTTTGGAATGGATTTTGCATTGTGATATAAAGCCACAAAATATACTTCTTGATTCTAACTTTCAGCCCAAGTTAGCAGATTTTGGATTATCTAAGCTGAAAAGTAGAAACAATTTGAATAATAATTCAGAATTCTCAATGATAAGAGGAACAAGAGGATACATGGCCCCTGAATGGATTTTCAATTTACCAATAACTTCTAAAGTGGATGTTTATAGTTATGGGGTTGTTTTGTTGGAGATGATAACTGGAAAAAGTCCTACAATGATGAATATAGAAGGAGATGGTGGTGAAGTGGCATATAACGGAAGGTTGATAACTTGGGTAAGAGAGAAAAAGAGGAGTAGTAGTACATATTGGGTGGAAGAAATTATGGATCCTTCAATGGTGAATAATTGTGATTTAAGTAAGATGGAAGTTTTGGCTAGAGTTGCTTTGGATTGTGTTGAGGAAGATAAAGATATTAGACCAACAATGAGTCAAGTGGTTGAGATGCTTCAAAGTTGTGAGAGAGATGTTGAGTGA 2406 0.3404 MAFTVSHIFLLIIFLFPFQYCSCYLTSLKKGSSLSVEKYEEDVIVSSNGIFSAGFYQIGENAFSFAIWFTELQNQSHDPTNIVWMANREQPVNGKHSKLFFLDTGNILLLDAGQHHTWSSNTASNAPSELYLKQDGNLVLRELQGTTILWQSFNFPTNTLLPNQPLTRHTNLVSSRSQSNHSAGFYKLFFDDNNVIRLDYDGPDVSSTYWPPSVLLPWQAGRSNYNSTRIALLDSLGKFISSDNYIFSTYDYGIDMQRRLTMDFDGNIRVYSRKNVSDNWYVSWQVISDSCIIHGICGANSTCSYDPKNGKKCSCLPGYQVKNHSDWSYGCEPMFDFTCNRSESTFLKLKGFELYGYDSNFVYNSTYESCENLCLQDCNCTAFQYKYEEDQGMFKCFTKLQLLNGRHSPGFLGTTYLRLPKGNNFFKEESMSLQDHVCRVQLHKDYAKKPTSKLVKFFLWLSIVVGGLEFLIFFVVFVFLNQTNKKSNANHQNHYHAILGFRRYSYSELKLATKNFSNEIGRGGGGVVYKGTLPDQRHAAVKRLNEAQQGEGEFLAEVSIIGRLNHMNLIEMWGYCVEGKHRLLVYEYMENGSLAETLSSKTNILDWSKRYDIALGTSRVLAYLHEECLEWILHCDIKPQNILLDSNFQPKLADFGLSKLKSRNNLNNNSEFSMIRGTRGYMAPEWIFNLPITSKVDVYSYGVVLLEMITGKSPTMMNIEGDGGEVAYNGRLITWVREKKRSSSTYWVEEIMDPSMVNNCDLSKMEVLARVALDCVEEDKDIRPTMSQVVEMLQSCERDVE 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01051 801 Pfam Protein kinase domain 517 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g01051 801 ProSiteProfiles Protein kinase domain profile. 514 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g01051 801 ProSiteProfiles Bulb-type lectin domain profile. 30 153 IPR001480 -
Tsu04g01051 801 Gene3D Transferase(Phosphotransferase) domain 1 589 801 - -
Tsu04g01051 801 Pfam D-mannose binding lectin 82 171 IPR001480 -
Tsu04g01051 801 SMART blect_4 35 156 IPR001480 -
Tsu04g01051 801 Pfam PAN-like domain 339 401 IPR003609 -
Tsu04g01051 801 Gene3D Phosphorylase Kinase; domain 1 477 588 - -
Tsu04g01051 801 Pfam S-locus glycoprotein domain 246 322 IPR000858 GO:0048544
Tsu04g01051 801 SMART serkin_6 514 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g01051 801 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
Tsu04g01051 801 SUPERFAMILY Protein kinase-like (PK-like) 489 794 IPR011009 -
Tsu04g01051 801 ProSitePatterns Protein kinases ATP-binding region signature. 520 542 IPR017441 GO:0005524
Tsu04g01051 801 Gene3D - 20 155 IPR036426 -
Tsu04g01051 801 CDD B_lectin 44 156 IPR001480 -
Tsu04g01051 801 PIRSF SRK 1 800 IPR024171 GO:0004674
Tsu04g01051 801 CDD PAN_AP_plant 340 420 - -
Tsu04g01051 801 CDD STKc_IRAK 520 794 - -
Tsu04g01051 801 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 5 798 - -
Tsu04g01051 801 ProSiteProfiles PAN/Apple domain profile. 339 430 IPR003609 -
Tsu04g01051 801 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 5 798 - -
Tsu04g01051 801 ProSiteProfiles EGF-like domain profile. 287 325 IPR000742 -
Tsu04g01051 801 SUPERFAMILY alpha-D-mannose-specific plant lectins 82 173 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01051 Tsu-Chr4 10221673 10225984 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01051 447 793 Receptor kinase-like Gene Family AT1G56120 38.873 5.01e-61 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Tsu04g01051 Pkinase 2.5e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01051 - - gmx:100784287 1105.12