Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01049 ATGAGTTGCTTTTCATGTTTCTCATCCCAAGAAAAGAAAGTACCAAAGAAGCCTAATAGTAATAATGGAAAGAAGATACAAAATCATCCTCCACAATCTCCTAAGATACCATCTCAACCTCAGCCAGAGAATCAATTTCAAAAGGCAAGGGTAAGCGCAAGCCCACAAACagaacataaaataaataaagagacCAAAAAAGATAGTGCTAGTAGCAACATTGCTGCACAAACATTCACCTTTAGAGAATTGGCTTCTATCACAAGAAACTTTAGGCAAGAAAATCTAATAGGTGAAGGTGGATTTGGAAGAGTTTATAAAGGAAGACTTGAAAAAACCAACCAGGAAGTAGCTGTGAAGCAACTTGATAGGAATGGATTGCAAGGGAACAGAGAGTTTCTTGTTGAAGTGTTAATGTTGAGCCTTTTGCATCATCAAAATCTAGTGAATCTAATTGGATATTGTGCTGATGGAGATCAAAGACTATTGGTATATGAGTACATGTCATTAGGATCCCTTGAGGATCATTTACTTGATCTTGAACCACACCAAAAGCCATTAGATTGGTCCACAAGAATGAAAGTAGCATTGGAAGCTGCAAAAGGATTAGAATATTTGCATGATAAGGCAAATCCACCAGTCATATACCGTGACTTAAAATCATCCAACATCTTATTGGACAAAGATTTCAATGCAAAACTCTCTGATTTTGGACTAGCCAAGCTAGGACCTACAGGTGACAAGTCTCATGTGTCTTCAAGAGTAATGGGGACTTATGGATACTGTGCACCTGAGTATCAAAGAACAGGTCAACTCACTGTTAAATCAGATATATACAGTTTTGGTGTTGTTTTGCTTGAATTGATTACTGGAAGAAGAACTATTGATAACACAAGACATTCAAGAGAGCAAAATCTTGTTTCTTGGgCATATCCAGTATTCAGGGATCCACATAGATATCCagaattagcagatccaaaactTGAAGGAAATTTTCCAATGAGATCACTACATCAAGCAGTGGCAGTAGCAGCAATGTGTCTAAATGAAGAACCATCAGTAAGACCATTGATAAGTGATGTTGTAACAGCTCTTAGTTTTCTTGGAGTAACACCAATTAATCAAGATCCAAACCTTTTGTCACCAATTGATATGCCATCACCAACacatgaaaatgaagaaaaaagtgCAACTATGAGTCTTCTTGACGATGATAGTGCCATCGTACGCCAAAGAGCTGTCGATGAAGCCATGGAATGGGGTTCAAATTCGAGAAATAAACCAAGTTATGACAGTTCTTCACATTTGTAA 1311 0.3593 MSCFSCFSSQEKKVPKKPNSNNGKKIQNHPPQSPKIPSQPQPENQFQKARVSASPQTEHKINKETKKDSASSNIAAQTFTFRELASITRNFRQENLIGEGGFGRVYKGRLEKTNQEVAVKQLDRNGLQGNREFLVEVLMLSLLHHQNLVNLIGYCADGDQRLLVYEYMSLGSLEDHLLDLEPHQKPLDWSTRMKVALEAAKGLEYLHDKANPPVIYRDLKSSNILLDKDFNAKLSDFGLAKLGPTGDKSHVSSRVMGTYGYCAPEYQRTGQLTVKSDIYSFGVVLLELITGRRTIDNTRHSREQNLVSWAYPVFRDPHRYPELADPKLEGNFPMRSLHQAVAVAAMCLNEEPSVRPLISDVVTALSFLGVTPINQDPNLLSPIDMPSPTHENEEKSATMSLLDDDSAIVRQRAVDEAMEWGSNSRNKPSYDSSSHL 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01049 436 SMART serkin_6 91 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g01049 436 ProSiteProfiles Protein kinase domain profile. 91 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g01049 436 CDD STKc_IRAK 97 365 - -
Tsu04g01049 436 MobiDBLite consensus disorder prediction 1 32 - -
Tsu04g01049 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Tsu04g01049 436 MobiDBLite consensus disorder prediction 379 398 - -
Tsu04g01049 436 Pfam Protein kinase domain 92 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g01049 436 ProSitePatterns Protein kinases ATP-binding region signature. 97 120 IPR017441 GO:0005524
Tsu04g01049 436 Gene3D Phosphorylase Kinase; domain 1 60 167 - -
Tsu04g01049 436 MobiDBLite consensus disorder prediction 39 56 - -
Tsu04g01049 436 PANTHER OS07G0668900 PROTEIN 1 427 - -
Tsu04g01049 436 Gene3D Transferase(Phosphotransferase) domain 1 168 372 - -
Tsu04g01049 436 MobiDBLite consensus disorder prediction 414 436 - -
Tsu04g01049 436 SUPERFAMILY Protein kinase-like (PK-like) 77 392 IPR011009 -
Tsu04g01049 436 MobiDBLite consensus disorder prediction 1 71 - -
Tsu04g01049 436 MobiDBLite consensus disorder prediction 422 436 - -
Tsu04g01049 436 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL26-RELATED 1 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01049 Tsu-Chr4 10197188 10199894 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01049 1 425 Glycoside Hydrolase AT3G07070 66.355 0.0 557
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Tsu04g01049 Pkinase 3.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01049 - - gmx:100786405 684.1